Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1185
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Entry
PC1_1185 CDS
T00934
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03030
DNA replication
pct03430
Mismatch repair
pct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC1_1185
03430 Mismatch repair
PC1_1185
03440 Homologous recombination
PC1_1185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pct03032
]
PC1_1185
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_1185
Enzymes [BR:
pct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC1_1185
DNA replication proteins [BR:
pct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC1_1185
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC1_1185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
XTBD
NB-LRR
Motif
Other DBs
NCBI-ProteinID:
ACT12233
UniProt:
C6DBW6
LinkDB
All DBs
Position
complement(1381555..1382580)
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AA seq
341 aa
AA seq
DB search
MIRLYPEQLTAQLHEGLRGCYLVFGSDPLLLQESLDSIKRVAQQHEFSEHFSFILDPHTD
WDAIFSTCQALSLFASRQSLLLILPENGPNAAMSENLVKLSGLLHPDILLILRGHKLTKA
QENSAWFKALAQDSVYINCLTPEQAQLPRWVSQRAKSMKLTLDEQATQLICYCYEGNLLA
LSQALERLSLLYPDGKLTLPRVESAVNDAAHFTPFHWLDALLAGKSKRAWHILQQLQQED
CEPVILLRTLQRELLQLLALKRRMSDTPLRTLFDQQKVWQNRRDLLTQALQRLSLQQLQQ
AVRLLTQVEITLKQDYGQPVWSELESLAMLLCGKALPEAFI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgattcggctttaccccgagcaactgaccgcgcagctccatgaggggctgcgcggttgt
tatttggtcttcgggtcagacccactcctgctacaggaaagcctcgatagcatcaaacgg
gtcgctcaacagcacgagttcagcgaacatttcagcttcattctggatcctcataccgac
tgggatgcgattttcagcacctgtcaggcgctcagcctgtttgcttcacgccaatcgctc
ttactaatcttgccggaaaatggcccaaatgccgcgatgagcgaaaatctggtcaagctt
tccgggctattgcatcccgatattttgctgattttgcgcggtcataagctgaccaaagcg
caggaaaacagcgcctggttcaaagcactcgcgcaagacagcgtctatatcaattgtctg
acgccagaacaggcacagcttccccgctgggtttcacagcgcgccaaatccatgaagttg
acgctggatgaacaggctacgcagctcatttgctattgctatgaaggcaatcttcttgcg
ctgtctcaggcgttagaacggctgtcgctgctataccccgatggtaagctgaccctgccg
cgtgtggaaagcgcagtcaatgatgccgcccacttcacgccgttccactggctcgatgcg
ctgctggcagggaaaagcaaacgcgcctggcacattttgcagcagctacagcaggaagat
tgcgaaccggttattttgctgcgcacactacagcgtgagttgctacaactgttggcgctg
aagcggcgtatgtcagacacgccgctgcgtacgttattcgatcagcaaaaggtgtggcaa
aaccggcgtgacctgctcactcaggcattacagcggctgtctctgcaacagctacagcag
gctgtgcgattgctgacgcaggtggaaataacgctaaaacaagactacggtcagcccgtc
tggtctgaacttgaatcgcttgccatgctgctgtgcggcaaagcattaccggaggcattc
atctga
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