Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1224
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Entry
PC1_1224 CDS
T00934
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_1224
Enzymes [BR:
pct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PC1_1224
DNA repair and recombination proteins [BR:
pct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PC1_1224
Prokaryotic type
PC1_1224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACT12272
UniProt:
C6DCC2
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All DBs
Position
1430758..1432251
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AA seq
497 aa
AA seq
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MTTHVATHHAATHLVWLRNDLRITDNLALSAACQDPNATVLAVFIATPAQWEKHDMAPRQ
AAFLLENLTSVQHALAEKGIPLHYHECADFAASVDWLVQFCAQQQATDLFYNYQYEINER
LRDKQVKDRLADSVVCHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLEAETTCV
PAPDARGEPIHNMMALAPFSYPQREVDSDDFPCGERAALQQLRRFCREQVQDYDRQRDVP
ALPGTSKLSPYLALGIVSPRQCFNRLRAECPDMLERREGGAFTWFNELVWREFYRHLIVS
WPQLCKHRPFTAWTQWVKWRESSEDLTAWQQGKTGYPIVDAAMRQLNGTGWMHNRLRMIC
ASFLVKDLLIDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGER
FDPEGRFIRHWLPELAAVPDKDIHQPHRWADKHHHQLNYPLPIVDHKTARQNTLAAFEAA
KNIGIADNDREENGKYA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcatgtcgctacacatcatgctgctacacatttagtctggctgcgcaacgac
ctgcgcattaccgataatctggcgctgtccgcagcctgtcaggatccgaatgccaccgtg
ctggccgtctttatcgcgacgcctgcacaatgggaaaagcacgatatggcgccgcgtcag
gcggcctttctgctggaaaatctgacgtcggtgcagcacgcgctggctgaaaaagggatc
ccgctgcactaccatgaatgtgctgactttgcggcatcggttgactggctggtgcaattt
tgtgcacagcagcaagccaccgatcttttctacaactatcagtatgaaatcaacgaacgc
ctgcgtgataagcaggtaaaagatcggctggcggatagtgtggtttgccacggctaccat
gacagtctgttgctaccgccgggcagtgtgctgacgggcaacggcgagatgtataaagta
tttacgccatttcgtcaggcttttatcaaacgactgttggaagcggagacgacatgcgtg
ccggcaccagacgcgcgcggtgaacctatccataatatgatggcactggcaccgttcagc
tatccgcagcgcgaggtggatagcgacgatttcccctgtggtgaacgtgcggcgttgcag
caattgcgccgtttttgccgcgagcaggtacaggattacgatcggcagcgggatgtcccg
gcgctgcccggcaccagcaagctttctccctatctggctctggggatcgtctcgccgcgc
caatgttttaatcgtctgcgcgccgagtgtccggatatgctggaacgacgtgaaggcggg
gcgtttacctggtttaacgagctggtctggcgcgagttttatcgtcacctaatcgtgtcc
tggccgcagctgtgtaaacaccgtccgtttaccgcctggacgcagtgggtgaaatggcga
gaatcatcagaggatttaaccgcctggcagcagggtaaaaccggctacccgattgtggat
gcggcgatgcgtcaactgaatggcacagggtggatgcacaatcgcctgcgtatgatctgc
gccagttttctcgtcaaagatttgctgatcgattggcgcgaaggcgaacgctactttatg
tcgcaactgctggatggcgatctggcggcgaataacggtggctggcagtgggcagcctcg
acaggcaccgatgcggcaccttattttcgcatttttaacccgacaacgcagggcgagcgc
ttcgaccctgaaggtcggtttattcgtcactggctgcctgaactggctgccgtgccggat
aaagatattcatcagccccatcgatgggctgacaaacatcatcatcagctgaactatccg
ctgcccatcgtcgaccacaaaaccgcacgtcagaacacgctggcggcgtttgaggcggca
aaaaatatcggtatagcggataacgatcgagaagagaacggtaagtatgcgtaa
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