Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1371
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Entry
PC1_1371 CDS
T00934
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PC1_1371
Enzymes [BR:
pct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
PC1_1371
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ACT12417
UniProt:
C6DD38
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Position
1599259..1600203
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AA seq
314 aa
AA seq
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MAYPTTNLTGIIGFAKAANVTGGTGGKVVTVNSLADFKSAVSGSTKTIVVLGASLKTSAL
TKVVFGSNKTIVGSFGGANVLTNIHLRADASSSNVIFQNLVFKHDVSIKDNDDIQLYLNY
GKGYWVDHCSWPGHTWSDNDGSLDKLIYVGEKADYVTISNCLFSNHKYGCIFGHPADDNN
SAYNGYPRLTICHNYYENIQVRAPGLMRYGYFHVFNNYVNKFNLAFTVAQNANVISERNV
FGTGAENKGMVDDKGNGSTFTDNGSSPAAVASKSPAAKWTASSNYSYSLMTTSAAKSWVV
SNSGAQNSALKFPS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcttatccaacaacgaatcttactgggattattggttttgcaaaagcagcaaatgtt
accggaggaacaggcggtaaagttgttacggtaaattctctggccgattttaaatcagcc
gtcagcggttccacaaaaacgattgtggtgctgggcgcatcgctgaaaacatctgcgttg
accaaagtcgtatttggcagcaataaaaccattgtcggttctttcggtggtgccaacgta
ttgaccaatattcacctgcgcgcagatgccagttcatctaacgttattttccagaatctg
gtttttaaacatgatgtttccatcaaggataatgacgatatccagctgtatctgaattac
ggtaaaggatattgggtggatcactgttcatggcctggacatacgtggagtgataacgac
ggtagcctcgataagctgatttatgtcggtgagaaagcggattacgtcacgatcagtaac
tgcttattctcaaaccataaatatggctgcatctttggtcatccagcagatgacaataac
agcgcctacaatggctatccgcgtttgaccatctgccataactattacgaaaatattcag
gttcgagcacctggcctgatgcgttatggttatttccacgtattcaacaactacgtcaat
aaattcaacctggcctttacggttgcgcagaatgccaatgttatttctgaacgcaacgta
tttggcaccggtgcggaaaataaagggatggttgacgataaaggcaatggttcaaccttt
acggataatggcagctcaccagccgccgtggcaagtaaatcacctgccgctaaatggacg
gcgtcatctaactattcatacagtttgatgaccacgtcagcggcgaaatcctgggtggtt
tctaattccggcgcgcaaaacagtgcgctgaaattcccgtcataa
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