Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1394
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Entry
PC1_1394 CDS
T00934
Name
(GenBank) transcriptional regulator, LysR family
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_1394
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PC1_1394
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HTH_24
HTH_30
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACT12440
UniProt:
C6DD61
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Position
1628952..1629905
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AA seq
317 aa
AA seq
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MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMT
EPGKELLVVAERILNDASNIRRLANVFTNNDTGQLVIATTHTQARYSLPPVIKAFRSLYP
QVRLVLNQGTPDEIVAMLHSGEADIGIASEQLINDPSLAAFSYYRWHHSVIVPEDHPLTQ
ERVITLEMLNAEPLITYRQGITGRSRLDRAFQAVGMSPDITLSAQDSDVIKTYVELGLGV
GIVADMSYDPARDTGLVRLNAEHLFEANTVWLGLKKGQLQRNYAWKFIQLCNTELSLDEI
KDKVFSDNDEAVIDYQI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgaactttcagcaactgaagattattcgtgaatcagcacggtgcaattacaacctgacc
gaggtggcgaatacgctgtttacctctcaatccggcgtgagccgccatatccgcgagctg
gaagaagagctggggattgaaatcttcattcgccgtggcaaacgcctgttaggtatgacc
gaaccgggaaaagagctgctggtggtggcggagcgcattctgaatgacgccagcaatatc
cggcggctggcgaatgttttcaccaataacgataccggccagttggtgattgcgaccacg
catacgcaggcgcgttacagcctgccgccggtgattaaagccttccgttctctgtaccca
caggtgcgtctggtgctgaatcagggcacgccggatgagattgtggcgatgctccattcc
ggtgaagcggatatcggtattgccagtgagcagttgattaacgatccctcgctggcagcg
ttctcctactatcgctggcaccattccgtcattgtgccggaggatcacccgctgacgcag
gagcgtgttattacgctagagatgctcaatgcagagccgctgattacctatcgtcaggga
attaccggtcgctcgcgtttggatcgtgcgtttcaggcggtggggatgtcaccagatatt
acgttgagcgcgcaggattcggatgtgattaaaacctatgttgagctggggctcggcgtc
gggattgtggccgatatgtcgtacgatcccgcgcgcgataccgggttggtgcggttaaat
gccgagcatttgtttgaagcgaataccgtctggctggggttaaaaaagggtcagttacag
cgtaactatgcctggaaatttattcagctgtgtaatacagaactgtcgctggatgagatt
aaagataaggtgttctcggataacgatgaagcggtgattgattaccaaatctga
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