Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1637
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Entry
PC1_1637 CDS
T00934
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_1637
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PC1_1637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
AAA_30
Zn_Ribbon_1
zf-tcix
DZR
AAA_16
AAA_22
SLFN-g3_helicase
MciZ
Zn_ribbon_3
DnaJ_CXXCXGXG
AAA
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
ACT12678
UniProt:
C6DEJ3
LinkDB
All DBs
Position
complement(1885051..1886811)
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AA seq
586 aa
AA seq
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MSFTLRPYQREAVSATLDYFRRHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCAWGLDADIFAAGLRQRESQGKVVFGSVQSVARNLDQFDNAFSLLIIDECH
RISDDDNSQYQQIIQHLQKNNPQLRLLGLTATPYRLGKGWIYQYHYHGMIRGDERCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVVQYDFSKLAARSNGLFSEADLNLELKRQQRITPH
IISQVVDYAQTRRGAMIFASTVEHAKEITTLLPAGQAALVSADTPAAERDALIDAFKQQS
LKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPGKTDCLILDYAGNP
HDLYTPEVGNSKPHAGSQPVQIFCPVCGFANLFWGKTTPDGDVIEHYGRRCQGWEIVENG
QRQQCDFRFRFKVCPHCGAENDIAARRCHQCDEVLVDPDDMLKAALKLKDALVLRCSGMS
FEQGQDAKGEWLKIIYHDEDGTEVSERFRLHSTAQRHVFLQQFLRVHQRAPGTPFNWQHA
ADVIAQQALLRAPDFVVARKHGKFWQIREKLFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcacgctacggccttaccaacgtgaggctgtttccgccacactcgactatttt
cgccgtcacacccagccggccgtcattgtcttgcccaccggcgcggggaaaagtctggtt
atcgccgaactggcgcgactcgcacgcggccgcgtgctggtgctcgcgcacgttaaggag
ctggtcgcacaaaaccacgccaaatactgcgcctgggggcttgatgcggatatcttcgcc
gccgggctgcgacagcgagaaagtcagggaaaagtggtttttggcagcgtgcaatctgtc
gcacgtaacctcgaccagttcgataatgcgttctctctgttgatcattgatgaatgtcac
cgtattagcgacgacgataacagccaatatcaacaaatcatccagcacctgcaaaaaaac
aatccacagctgcggctgctcggcttaaccgccacgccttatcggcttggcaaaggctgg
atatatcagtatcactatcacggcatgatacgtggcgacgaacgctgtttgttccgtgat
tgtatctatgaactgccgctgcgctatatgatcaaacatggctttctggtgccgcctgac
agactggatatgcccgtggtgcagtatgatttcagcaaactcgccgcccgcagcaacggg
ctattcagtgaggctgatctgaacctcgaactcaaacgtcagcaacgcattacgccgcac
atcatcagccaggtcgtcgattatgcgcaaacgcggcgcggggcgatgatttttgcgtcc
accgtcgaacacgccaaagaaattacgaccttgttaccggctggccaggcggcgttggtc
agcgccgatacaccagcagccgagcgcgatgcgctgattgacgcctttaaacagcagtcg
ctgaaatatctggtcaacgtggcggtgctgacaacgggttttgatgccccacatgtcgat
cttatcgctatccttcgcccaacagaatccgtcagcctgtaccagcaaatcgtcggacgt
ggtttacgcttatatccgggaaaaacggactgtctgattctggattacgcgggcaatcca
cacgatctctatacgccagaagtcggcaacagcaagccgcatgccggtagccaaccggtg
caaatcttctgccccgtatgcggctttgccaacctcttttgggggaaaaccactccagac
ggcgacgtcatcgaacactatggtcgccgctgtcagggttgggaaatagtggaaaatggc
caacgccaacagtgtgatttccggtttcggtttaaagtctgtccgcactgcggcgcggag
aatgatatcgcagcgcgccgctgccaccagtgtgatgaggtgttggtcgatcccgacgac
atgctgaaagcagcgcttaagctgaaagatgcgctggttttacgctgtagcggcatgagc
ttcgagcaagggcaggatgcgaaaggagaatggctgaaaatcatctatcatgacgaggac
ggtaccgaagtaagcgaacgttttcgcctgcactctaccgcgcaacgccatgttttcctg
caacagtttttacgcgttcaccaacgcgcaccgggaacgccgtttaactggcagcatgcc
gccgacgttatcgcgcagcaggccttacttcgcgccccagactttgttgtcgcccgcaaa
cacggaaaattctggcaaatccgtgaaaagctctttgattatcagggacgatttcgtcgc
gccaatgagctccgcggctaa
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