Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1655
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Entry
PC1_1655 CDS
T00934
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PC1_1655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_1655
Enzymes [BR:
pct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PC1_1655
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PC1_1655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACT12696
UniProt:
C6DEL1
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All DBs
Position
complement(1905195..1906040)
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AA seq
281 aa
AA seq
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MKYIGAHVSASGGVDQAVIRAHEIKATAFALFTKNQRQWQAAPLSTEVIDRFKAACEQYA
YTSAQILPHDSYLINLGHPDAEALEKSRIAFIDEMARCQQLGLSLLNFHPGSHLKQIEEA
DCLARIAESINIALAETDGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDT
CHAFAGGYDLRTEADCEATFAEFDRIVGFRYLRGMHLNDAKSAFASRVDRHHSLGEGNIG
KTAFSYIMKDARFDGIPMILETINPDIWADEIAWLKSEAQC
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcggggcacacgttagcgcatctggcggggtcgatcaggccgtgattcgc
gctcatgagataaaggcgacggctttcgcgttgtttaccaagaaccagcgccaatggcag
gctgcgccgctcagcaccgaggtcatcgaccgttttaaagccgcctgtgaacagtatgcc
tatacgtcagcacaaattcttccccacgacagttacctgattaatctgggacacccggac
gccgaggcgttagagaaatcacgtatcgcgtttattgatgaaatggcccgctgtcagcaa
cttgggctcagcctgctgaattttcacccaggtagccatctgaaacagatcgaagaagca
gactgtctggcccgtattgcggagtccatcaacatcgcgctggcggaaacggacggggtc
accgccgtgattgaaaataccgccggacaaggcagtaatctcggattccgttttgagcat
ctggcggccatcattgacggtgtagaagataaaagccgtgttggcgtctgtatcgatacc
tgtcatgccttcgctggcggctacgacctaaggacggaagcggattgcgaagcgaccttt
gcagaatttgatcgcatcgttgggtttcgctatctgcgaggaatgcatttgaatgatgcg
aaaagcgcattcgccagtcgcgttgaccgacaccatagcctgggagaaggcaatatcggc
aaaacggccttcagctacatcatgaaagatgcccgttttgatgggatcccaatgattctg
gagacaatcaatcccgatatctgggctgacgaaatcgcctggctcaagtccgaagcccaa
tgttaa
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