Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1673
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Entry
PC1_1673 CDS
T00934
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pct03009
]
PC1_1673
Enzymes [BR:
pct01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PC1_1673
Ribosome biogenesis [BR:
pct03009
]
Prokaryotic type
ribosomal protein modification factors
PC1_1673
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ACT12714
UniProt:
C6DEM9
LinkDB
All DBs
Position
complement(1928023..1929351)
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AA seq
442 aa
AA seq
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MSNIAPPQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSA
VQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPK
PTHNPFTSLVPEQGVKLTPRHYAYLKISEGCDHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVDAGVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVY
PYPHVDDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLT
LRSTFIVGFPGETEEDFQMLLDFLKEAKLDRVGCFKFSPVEGAAANALPDQVPEEVKEER
FHRFMQLQQAISAQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVK
VGDIVKVKVEHADEYDLWGSRV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatcgcccccccacaaccacgtatcggctttgtttccctcggctgcccgaaa
aacctcgtcgactccgagaggattctgaccgaactgcgtactgaaggttatcaggtcgtc
ccccgctatgacgacgctgaactagtgatcgtcaatacctgtggttttattgacagcgcc
gtacaagagtcgctggaagccatcggcgaagcgctgaatgagaacggtaaagttatcgta
acaggctgtctgggtgccaaagaaaatcaaatacgcgaagtgcatccaaaagttctggaa
attaccggtccgcacagctacgagcaggtgctgtcgcacgtgcatcaatatgttcctaaa
ccgacgcacaacccgtttaccagtttagtccctgagcagggcgtaaaactcacgccgcgc
cattacgcgtatctgaaaatttcagaaggctgtgaccaccgctgcacattctgcatcatc
ccatctatgcgtggcgatttggatagccgcccaatcggttcggtgctggatgaagcgaag
cgtctggttgatgccggcgtaaaagagctgctggtaatttctcaggatacctcggcgtac
ggcgcagatgtgaagcagcgtaccggtttttggaacgggcagccggtcaaaaccagtatg
gtcagcctgtgtgagcaactggcgtcgctgggcgtgtgggtgcgcctgcattatgtctac
ccttacccacacgtagacgatgtgatcccattaatggcagaaggcaaaatcctgccttat
ctggacatcccgctccagcacgctagcccgaaaattctcaagctgatgaagcgccctggc
gcagtcgaaagaacgctggaacgtattaaacgctggcgcgaaatctgcccggacttaacg
ctgcgttctacctttattgtcggtttccccggtgagacggaagaagatttccagatgctg
ctcgacttcctgaaagaagccaaactcgaccgcgtgggctgctttaaattcagcccggtc
gaaggtgctgcggcaaatgcattgccggatcaggtgccggaagaggtcaaagaagaacgt
ttccaccgtttcatgcagcttcaacaggcgatctccgcccagcgtttgcaggataaaatt
ggccgtgaagtgctggtactgattgatgaaatcgacgaagaaggcgcgattggccgcagc
atggccgatgctcctgaaatcgacggcgcagtttacctgaacggtgaaactggcgtgaaa
gtcggtgatatcgttaaggtcaaagttgaacacgctgacgaatacgatctgtggggtagc
cgagtataa
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