Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1769
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Entry
PC1_1769 CDS
T00934
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PC1_1769
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_1769
Enzymes [BR:
pct01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PC1_1769
Transporters [BR:
pct02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PC1_1769
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
DEAD
AAA_25
APS_kinase
AAA_22
RsgA_GTPase
DUF87
AAA_29
AAA_30
AAA_16
SLFN-g3_helicase
nSTAND3
MMR_HSR1
NB-ARC
G-alpha
AAA_18
ABC_membrane_2
AAA_15
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ACT12810
UniProt:
C6DFA1
LinkDB
All DBs
Position
2041296..2043089
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AA seq
597 aa
AA seq
DB search
MSKMVGYFFPLQVYYMLNDKDLSTWQTFRRLWPMISPFKAGLVIAAIALIINAASDTLML
SLLKPLLDDGFGKAERAVLIWMPLVVIGLMILRGVSGFISSYCVAWVSGKVVMNMRRRLF
SHIMGMPVAFFDQQSTGTLLSRITYDSEQVAASASGALVTVVREGASIIGLFILMFYYSW
QLSIILIVIAPIVSIAMRVVSKRFRSISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDV
ETKRFDQVSNRMRQQGMKLVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTIT
VVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDMEQERDTGKREIERAKGELEFR
QVNFAYPGKENLALKDINLHIPAGKTVALVGRSGSGKSTIASLITRFYDIQSGEVLLDGH
DLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNEHYSREEIERAAKMAHAMDFINK
MDHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQSALDE
LQKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHVALLAANGAYAQLHKMQFGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatggtcggctatttctttccgcttcaggtttactacatgctgaatgataaa
gatctctccacctggcagacttttcgtcgcctttggccgatgatctctccttttaaagca
gggcttgttattgctgcgattgctctcattattaacgcagccagcgatacattaatgctc
tctctgcttaaacccttgttagatgacggatttggcaaggcggaacgtgccgtattgatc
tggatgccgctggtggtcatcggccttatgatactgcgcggggtgtcaggatttatatcc
agctactgcgtcgcctgggtttcgggcaaagtggtgatgaacatgcgtcgccgtcttttc
tcccatatcatggggatgccggtggcgttttttgaccagcagtcaaccgggacgctgctt
tcccgtattacttatgattccgaacaggttgcggcctctgcgtccggtgcgttggttacc
gtcgtcagagaaggggcatcgattatcggcctgttcattctgatgttctactacagctgg
cagttgtccatcattctgattgtgattgcgccgatcgtgtcgatcgctatgcgcgtggtg
tccaaacggttccgcagtatcagtaaaaatatgcaggatacaatggggcacgtcactacc
agcaccgagcaaatgctaaaaggccataaagaagtgctgatgtttggcggtcaggacgtt
gagactaaacgtttcgatcaggtcagtaaccggatgcgccaacagggcatgaaactggtg
tctgcctcatcaatctccgatcctatcatccagttgatcgcttcgctggcgctggcattt
gtactgtatgccgccagcttccctagcgtaatggaaacgttgactgccgggacgatcacg
gtggtgttctcttccatgatcgcgctgatgcgtccgttaaaatcactgaccaacgttaac
gcgcaattccagcgtgggatggccgcgtgccagacgctgttcgcgattctggatatggaa
caggagcgcgatacgggtaaacgcgaaatcgagcgagcgaaaggcgaacttgaattccgt
caggtgaattttgcttatcctggtaaggaaaatctggcgctgaaggatatcaatctgcat
atcccagcaggaaaaacggtggcattggttgggcgctctggttcgggtaaatcaacgatt
gccagcttgattacacgtttttacgacatccaatcaggtgaggttttgctcgatggccac
gacctacgtgagtatcgcctgtcctccttgcgtaatcaggtggcgttggtttctcaaaac
gtgcatctgtttaacgatacgatagcgaacaatatcgcctatgcccgcaatgagcactat
agccgtgaggaaattgagcgcgcggcgaaaatggcgcatgcgatggatttcatcaataag
atggatcacggtttggatacggtcattggtgaaaatggcgtgatgctttccggtgggcaa
cggcagcgcatcgcgattgcccgcgcgctgctgcgtgatagcccgatcctgatcttggat
gaggctacgtcggcgttggatacggaatctgaacgtgcgattcaatctgccttagacgaa
ctgcaaaaagatcgtactgctttggtgattgcacaccgtctctccacgattgaaaaagcg
gatgagattctggtggttgaggatggcagaatcattgaacgtggtaaccatgttgcattg
ttggcggcaaacggtgcctatgcccaactccataaaatgcagtttggcgaatga
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