Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1780
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Entry
PC1_1780 CDS
T00934
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pct01002
]
PC1_1780
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pct01011
]
PC1_1780
Peptidases and inhibitors [BR:
pct01002
]
Cysteine peptidases
Family C82
PC1_1780
Peptidoglycan biosynthesis and degradation proteins [BR:
pct01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PC1_1780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACT12821
UniProt:
C6DFB2
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All DBs
Position
2056525..2058255
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AA seq
576 aa
AA seq
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MLLLHKRKMVRLLLRVGCIWVGSLSPSFSVLAASPTVISGLSQSSGAVSVEKSRAGLLSA
LPHGVSVHYLSDLSSLYAQHQMQPMWADNRAVQQFQQQLAELAIAGVQPQFTTWVTWLTD
PQLTGFARDVVLSDAMLGYLQFVSGVERNGNDWLYSSVPYRLQSPALNIVSQWQQAVKSG
TSAAYVVSLAPQHSQYAKMHEALKTMLTDNRPWPSLNLTESLRPEQQSRELAVLREILQR
TGMLSSTESITLFNENTAATTIPTGQSPLVENGAAIYTGELVEAVKRFQHWQGLEDDGVI
GKRTRDWLNVSPQMRATLLALNIQRLRLLPDNVHTGIMVNIPNYSLIYYQDGAERLSSRV
IVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLIRQDIIPKVVRDPGYLQRHGYTVLSGWSQ
DAEVIDPSMIDWQIVSPERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQR
DIRALSSGCVRVNKASELASMLLQDAGWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTA
WVAEDGRPQFRTDIYNYDDTARAGTKVLSKAGLLLQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttacataaacgaaaaatggtcaggctgctgttgcgcgtgggttgtatttgg
gtcggaagcctgtctccttcgttttcggtgctggcagcatctccgacggtgatatctggc
ttatcgcaaagctcgggtgcagtttctgtagaaaagagtcgtgcagggcttctttcagcg
ctgccgcatggcgtgtcggtacattatctctctgatttatcatcgctttatgcccaacat
cagatgcaaccgatgtgggcggataatcgcgcggtgcaacagtttcaacagcagcttgcc
gaattggcgatagcgggcgtacagccgcagttcaccacgtgggtgacttggcttaccgat
ccgcaattgaccgggtttgcgcgcgatgtcgtgctatcggatgcaatgctgggctatttg
cagtttgtttctggcgtggagcgtaacggcaatgattggctgtacagcagcgtaccttat
cgtctgcaatcgcctgcgttgaatatcgtttctcaatggcaacaggccgtaaaatccggc
accagtgcggcctatgtggtttcgctggcaccgcagcattcacagtacgccaaaatgcat
gaggcgctgaagacgatgctgacggacaatcgcccgtggccgagtctgaatttgacggaa
tctctacgtccggaacagcagagccgagagctggcagtactgcgtgaaattctacagcgt
actggcatgctgtcgtcaacggagagcattacgctgtttaacgaaaataccgccgcgacg
acgataccgacaggccaatctccgttggtcgagaatggtgctgcgatctacacgggtgaa
ctggttgaagcggtgaaacgcttccagcattggcaagggctggaagatgatggcgtcatt
ggtaagcgtactcgcgattggctcaatgtgtccccacaaatgcgcgcgacgctgctggcg
ctgaatattcaacgtctgcgcctgctaccggataatgttcacaccggtattatggtgaat
atccccaattattcgctgatctattatcaggacggcgctgaacgcttatcgtcacgcgtt
attgttggacagcccaagcgtaagacgccgttgatgagtagttcgctgtataacgtggtg
gtcaatccgccgtggaatgtccctacgacgctgattcgacaggatatcattcctaaagta
gtacgcgatcccggttatctacagcgtcatggctatacggtgttgtccggctggagtcag
gatgcggaagtgattgatccatcgatgatcgattggcagattgtgtcaccagagcgcttc
ccctatcgcttacgtcaggctcctggcgcgaacaactcgctggggcgctataaattcaat
atgccaaattcggaagcgatttatctgcacgatacgcccaatcacaacttgttccagcgt
gatatccgggcgctgagttccggctgtgtgcgggtcaataaggcatcggaattggctagc
atgctattgcaggatgcgggatggaataatagtcgaatttcttccacgctggatcagggg
aacacgacctttgtttcaatgaagcaccggattccggttaatctctattacctgacagcg
tgggtagcggaagatggcaggcctcaattccgcacagatatttacaattatgatgatact
gcccgagccgggacgaaagtcctctccaaagcagggttattgcttcagtaa
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