Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1884
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Entry
PC1_1884 CDS
T00934
Name
(GenBank) Oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00040
Pentose and glucuronate interconversions
pct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PC1_1884
Enzymes [BR:
pct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
PC1_1884
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
ACT12925
UniProt:
C6DFY2
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Position
2175977..2177143
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AA seq
388 aa
AA seq
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MAKGNKIPLTFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPW
NYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRVDLVTGEA
QTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESC
THEFWVPDGSAMIYVSYLKDDSNRYIRSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTP
DNKQVLFTSDVDGKPALYLAKVPDSVWN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaacaagatccccctaacgttccatacctaccaggattcagcaaccggc
accgaagttgtgcgtttaaccccgcccgatgttatctgccatcgcaattatttctaccag
aagtgtttcttcaacgacggcagcaagctgctgtttggtgctgcgtttgacggcccgtgg
aactactatctgctggatttaaaagagcagagcgctacgcagttgacagaaggtaaaggc
gacaacaccttcggtggtttcctgtctccgaatgacgatgcgctgtattacgttaaaaat
acccgtaatctgatgcgtgtcgatctggctacgctggaagagaaaacaatttatcaggtg
cctgacgattgggtcggctacggtacttgggttgccaactcagattgcaccaaaatggtc
ggtattgaaatcaagaaagaagactggaagccactgaccgattggaaaaaattccaggaa
ttctacttcactaatccttgctgccgcctgattcgtgtcgatttggtcacaggcgaagcg
cagaccatccttcaggaaaaccagtggctgggtcacccaatctaccgtccgggtgatgac
aacacggttgctttctgccacgaaggcccgcatgacctggttgatgcccgtatgtggttc
atcaacgaagatggcaccaacatgcgtaaagtgaaagagcatgctgaaggcgaaagctgc
acccacgaattctgggtaccagatggttccgcgatgatctatgtctcttaccttaaagac
gatagcaatcgctatatccgcagcatcgatccggttacgctggaagatcgtcaactgcgt
gtcatgccaccgtgttctcacctgatgagtaactatgatggcacgctgttggtgggtgac
ggttccgatgcaccagtagacgtacaggacgatggcggctacaaaatcgagaacgatccg
ttcctgtatgttttcaacctgaaaaccggcaaagaacaccgtattgcacagcacaataca
tcatgggaagtattggaaggggaccgtcaggtaactcacccacatccttctttcacgccg
gataataaacaagtcctgtttacttctgacgtagatggcaaacctgcgctgtatctggcg
aaggttcctgattcagtctggaactaa
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