Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2170
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Entry
PC1_2170 CDS
T00934
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00040
Pentose and glucuronate interconversions
pct01100
Metabolic pathways
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PC1_2170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_2170
Enzymes [BR:
pct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PC1_2170
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
ACT13209
UniProt:
C6DI36
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Position
2482262..2483968
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AA seq
568 aa
AA seq
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MKKFALSLLAGLVALQASAATPDRLTIVNQYVDNVLTKAGDQYHGQSPTPLLADGIDPRT
GKQMEWIFPDGRHAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKEATARFIRGFWNAHV
YDWKIMETSRHGKYGQKMGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVIKPYPADNSFLLSYSRAYTVLPDAELWRVA
RGIARAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNI
ISTRYKNGFFMADPNRQYADVDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRME
DGSTRISTRDNEIFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgcgctgtcgcttcttgcaggtctggttgctttacaggccagcgccgct
acaccagaccgtctcactatcgtcaatcagtatgttgacaacgtgctgaccaaagccggt
gaccagtatcacggtcaatcacccacaccgctgctcgccgatggtatcgatccgcgtact
ggcaagcagatggaatggatcttccctgacggccgccatgccgtgttgtcgaacttctcc
gcgcagcaaaacctgatgcgcgtgctggtcgggttaagtaacctgagcggcaaccccagc
tataagcagcgtgccgaagcgattgtgaagtatcacttccaacattatcaggatgaaagt
ggtctgctaatttggggcggccaccgtttcgttgatttaaaaacgctgcagccggaaggc
ccgagcgaaaaagagatggtgcatgagctgaaaaatgcctatccctactacgatttgatg
ttcagcgttgataaagaggccaccgcacgctttattcgcggtttctggaatgcgcacgtt
tatgactggaaaatcatggaaaccagtcgccacggtaaatacgggcaaaaaatgggcgca
ctctggcaaagcccgtttgagcaacagccgcccttcttcgccaccaaaggcctcagcttc
ctgaatgcggggaacgatctgatctattccgcctcgctactgtacaaatacaataaagaa
gacggcgcgctggtctgggcaaaacgtctggcacagcagtatgtgctgccacgagataaa
gcaaccgggcttggcgtgtatcaatttactcaggcgctgaagcgtgatgaaaccaccgac
gatgccgatacgcattccaaatatggcgatcgcgcccagcgtcagtttggccctgagttc
ggccccaccgcgctggaaggcaatatgatgctgaaaggacgcaccagtacgatctattcc
gaaaatgcgctcatgcagcttcagttgggtaaagatttaggcgcggaaggcaaggaactg
ttgacctggacaaccgatggcctgaaagcctttgccaagtatgcctacaacgagtccgat
aacacgttccgcccgatgctcgctaacggcaaagatctctccaattacgttctgccgcgt
gatggctactacggcaaaaaaggcaccgtgatcaagccttatcctgcggataactcattc
ctgctttcgtattctcgtgcctataccgttttaccggacgccgagttgtggcgtgtcgca
cgtggcatcgctcgcgcacaagggctgggtgagttaggttcagcgccgggtaaagacgtc
aaagtggatctcgctaccaagaacaacgatccttacgccttgttcgcgctgctggatctg
tatcaggcgagcaaagtgaaagactatctgtcgctggcggaaaaagtgggcgataacatt
atcagcacgcgttataagaacggcttcttcatggccgatcccaacagacaatatgcggat
gtcgataccatcgagccttatgccctgttagcgctggaagccgcggtacgcaatcagcca
cagtccgttgccccgttcctgaatggtgcgggcttcaccgagggcggctaccgtatggaa
gacggttcaactcgcatatctactcgcgataacgaaatcttcctgctgaacgttggcgaa
acactcaaacccaacaataagaagtaa
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