KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2188
Entry
PC1_2188          CDS       T00934                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PC1_2188
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pct02044]
    PC1_2188
Secretion system [BR:pct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC1_2188
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C DUF6484 Gp138_C Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: ACT13227
UniProt: C6DI54
LinkDB
Position
complement(2518230..2520200)
AA seq 656 aa
MANSTGLQFTVKVGALAAGTFAVVDFRLDEGLNRPFSLSLSLASAQPDVDFGAVLDQPCE
LMIWYEGELKRRVSGIVSGFTQGDTGFRRTRYQIDVRPALWRLGLRTNARIFQAQTPDAI
ISMLLEEAGITDYAFALRNEHAVREYCVQYRESDLAFVTRLAAEEGMYFFHEYEEGKHRV
VFADDAGALTKGPELFFNLATQGLSEGEYIRRFHYAERVSTAEVELKDYSFKTPAYGLSH
KKMSGELEHQRESYQHYDYPGRYKQDPSGKAFSGYRLDALRSGAVTGEGESNCAGLMPGS
TFTLTEHPNTTLNAVWQTVSVTHVGQQPQALEEESGGEPTTMSNSFAVVKGTTTWRTAMP
YKPMVDGPQIATVVGPAGEEIYCDPYGRVKLQFPWDRYGASNDQSSCWVRVSQGWAGGQY
GMIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHVTNPSPYPLPANKTRTTLRSKTHKGKGF
NELSFEDATDNEEIFLHAQKNMAVRVLNSKDERVDYNRTTSIGHDEELVVANNRKITVEG
NQDHKTTGNHLSLTEGDSGIQVKGDLTQKINGVFSVDSNGDLTLQSGSKLTLRVGSSFVV
IHAGGVDIKGPAINLNSGGSPGDVALPADPAILKAAAAAGTMFVAHCPAKEKENSE
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggcaaacagtacaggattacagttcaccgttaaggtcggtgccctggcggcaggcact
tttgcagtggtggatttcaggctggatgaaggattgaaccggcctttcagcctgtcgcta
agtctggcgagcgcacagccggatgtggatttcggcgcggtgctggaccagccgtgcgag
ctgatgatttggtatgaaggcgagctgaagcgccgggtcagcgggattgtcagtggcttc
acgcagggcgacaccggttttcggcgcacgcgctatcagatagacgtccgtccggcgctg
tggcgactggggctgcgcaccaatgctcgtatttttcaggcacagacgccggatgcgatt
atcagcatgctgctggaagaggctggaatcactgactacgcctttgcgctgcgcaatgag
cacgcagtgcgggaatattgcgtgcagtaccgggaaagcgatttggcgtttgtcacccgt
ctggccgccgaggagggcatgtatttcttccacgaatacgaagagggtaaacaccgggtg
gtgtttgccgacgacgccggggcgctgaccaaaggcccggagctgttcttcaatctggcg
acacaagggctgagcgagggggaatacattcggcgcttccactacgcagagcgggtgagc
actgccgaagtcgagttgaaagactacagcttcaaaacgccggcttacgggctgtcacac
aagaagatgagcggtgaacttgagcaccagcgtgaaagctaccagcattacgattatccg
gggcgctataagcaagacccgagcggcaaggcgttcagcggctaccggctggatgcgctg
cggtcaggggcggtgacgggcgaaggggaatccaactgtgcggggctgatgccgggcagt
acgtttaccctgacggagcatccgaatacgacgctgaatgcggtctggcagacggtgagc
gtgacgcacgtcgggcaacagccgcaggcgctggaagaggaaagcggtggtgaaccgacc
acgatgagtaacagttttgcggtggtgaaagggacaacaacgtggcgcaccgcgatgccg
tataaaccgatggtggacggcccgcaaatcgccactgttgtcggtccggctggggaagaa
atctactgtgacccgtatggtcgggtgaaactgcaattcccgtgggacagatacggcgcc
agtaacgaccagagctcctgctgggtgcgcgtcagtcagggctgggcgggcggtcagtac
ggcatgattgctatcccccgtatcggccatgaagtgatcgtcagcttcctggagggcgat
ccggatcagccgattgtcaccgggcggacgttccacgtcactaatccgtctccctatccg
ctgcctgccaacaaaacacggaccacgcttcgttccaaaacccataaaggcaaaggcttt
aacgaactcagcttcgaggatgcgaccgacaacgaagagatcttccttcatgcccagaag
aatatggctgtgcgggtactgaattccaaagatgagcgcgtggactataaccgcacgacg
agcatcggacatgatgaagaactggtggtcgccaacaatcgtaaaatcacggtggaaggc
aatcaggatcacaaaaccaccggcaaccatttatcgctgaccgaaggcgatagcggcata
caggttaagggcgatctgacgcagaaaatcaacggagtattcagcgtagacagcaacggc
gatctgacgctgcaaagcggcagcaaactgacgctccgcgtcggaagcagctttgtggta
atccacgctggtggagtggacatcaaagggccagccatcaacctgaattcaggcggcagt
ccgggcgatgttgccctccctgctgacccggcgatattgaaagcagcggcggccgcaggg
acgatgtttgtggcgcactgtccggcaaaggagaaagaaaacagtgagtga

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