KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2207
Entry
PC1_2207          CDS       T00934                                 
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
  KO
K03220  type III secretion protein D
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:pct00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pct02044]
    PC1_2207
Secretion system [BR:pct02044]
 Type III secretion system
  Type III secretion core apparatus
   PC1_2207
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C Peptidase_S49 FHA Ctf4_C Pilus_CpaD
Other DBs
NCBI-ProteinID: ACT13246
UniProt: C6DIX6
LinkDB
Position
2538151..2539080
AA seq 309 aa
MFELRVLTGLHRGAALPLCGNAWRIGAADDADLVLYDPGIAPCHGQLEKTADGWALSAQD
GALCNAEGHTVEQIDALPPGTPFALGQIWLCIVAADTPWPDDSETPTTAEEDVPPVEPSA
DEPPVHIASPIPTPAPRLPLWAKASYLLLGALLLVMVGSWQLQESVAMPAAPPPQDTRKP
LSTLPQLESTLRIMLQERELSAAVKVAAYQDRVTLTGQLTPDDQKKLERMLAQLHQRYRT
ALSVDNRTQLKTEQLPFQIVQVTSGSRANVVTADGQRFFIGDEIDNLRLVKIDEHQIEFS
GRQQITVNW
NT seq 930 nt   +upstreamnt  +downstreamnt
atgtttgaattacgcgtgctgactggtttacatcgcggtgcggcgctgccgctctgtgga
aacgcctggcgcatcggtgcagccgatgatgccgatctcgtgctctacgatcccggtata
gcgccttgccacggccagttggagaagaccgctgacggctgggcgctcagcgcacaggat
ggtgcgttatgcaatgcggagggccataccgtcgaacagattgacgctctgccgcccggc
acgccctttgcgctggggcagatttggctctgcattgtcgcggcggataccccctggcct
gacgacagcgaaacgcctacaaccgcagaagaagatgttccccctgtggaaccatccgcc
gacgaaccgccagttcatatcgcgtcgcctatccctacgcccgcgccacgcctgccgctg
tgggccaaagccagctacctgctacttggcgcattgctgctggtgatggtaggcagttgg
caactacaggagagcgtcgcgatgcctgccgccccgccgccgcaggatacccgcaaaccg
ctcagcacgctgccacagctagaaagcacgctgcgcatcatgttgcaggagcgggaactg
agcgcggccgtgaaagtggcggcgtatcaggatcgcgtcacgctcaccggacaattaacg
ccggacgatcaaaaaaagctggaacggatgctcgcccaactccaccaacgttatagaacc
gcgctgtccgtggataaccggacgcagctgaaaacggagcaactgccgtttcagatcgtt
caggtaacgagcgggtcgcgggcgaatgtcgtcacggcggatggccagcgctttttcatc
ggcgatgagatcgacaacctgcgtctggtgaaaattgatgagcaccagattgaattcagc
ggcagacaacagataacggtgaactggtaa

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