Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2229
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Entry
PC1_2229 CDS
T00934
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_2229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_2229
Transporters [BR:
pct02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PC1_2229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACT13268
UniProt:
C6DIZ8
LinkDB
All DBs
Position
complement(2560650..2561918)
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AA seq
422 aa
AA seq
DB search
MSQSDIAAAVPSGGSEENSTLKQQLWLAQKAYKKRSLLLIAPLFLFIVVSFLFPITSILG
KSVSNPELRDNMPQTIAAMRQWSGNDVPDETVFRALVGDLRDARSSGKLSTITKRLGYEG
AEYRTLITRTLRKLPAEGSSDVRDQLIHEQPMWGELATWKTFDRAARPFTSYYLLAVFDH
KVDATTQQIVPQPADQALYVDVLLRTLLMAGVVTLLCVGLGYPLAYWLAKQPSNRANLLL
ILVLLPFWTSLIVRTASWIVLLQSGGLINRSLMNIGIIDEPLVLVFNRIGVYISMTHILL
PFFILPLYAVMKGISPNYVRAAVSLGAHPFIAFWRVYVPQTYAGVTAGALLVFMMAIGYY
ITPALLGGPSDQMLSYFVAFFTNTTMNWGMAAALGTQLLIIVTLLYVVYIRVTRTNAEAA
AH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagagtgatatcgccgccgctgtgccgtctggcggaagtgaggaaaactcgacc
ttgaaacaacaactgtggctggcgcagaaagcctataaaaaacgctctctgctgctgatt
gcaccgctgtttctgtttatcgtggtgagttttctcttcccgatcacctcgattttgggg
aaaagcgtctccaatccggaattgcgcgacaatatgccacagaccattgccgcgatgcgg
caatggtcgggcaacgatgtgccggatgaaaccgtctttcgggcgctggtcggcgatctg
cgtgatgcccgcagcagcggtaagttaagcacgattaccaaacggctagggtatgaaggc
gcggaataccgcacgctgattacccgcacattgcgcaagctgcccgcagagggcagcagc
gacgtgcgcgatcaactgatccatgagcagccgatgtggggagaattagcaacctggaaa
acgttcgatcgcgcagcgcgtccttttaccagctattacctgttggcggtgtttgaccat
aaagttgatgccaccacgcagcaaatcgtcccacagccagccgatcaggcgctgtatgtg
gacgtgctgctgcgcacgctgctgatggcgggcgtggtaacactgctgtgcgtggggctc
ggatacccgctggcgtactggctggcgaagcagccttctaaccgcgccaatctgttgcta
attttggtgctgctgccgttctggacatcactgatcgttcgcaccgcgagttggattgtg
ctgttgcagtccggtggattaatcaaccgttcgctgatgaatatcggcattatcgatgaa
ccgctggtgctggtatttaaccgtatcggtgtctacatctcgatgacccacatcctatta
ccgttctttattctaccgctgtacgcggtgatgaaaggcatttccccgaactatgtgcgt
gcggcggtctcgctgggtgcgcatccgtttatcgccttctggcgggtttatgtgccgcaa
acctacgccggtgtgacggcaggagcgctgctggtctttatgatggcgattggctactac
attacgccagcgctgctgggcggaccgagcgaccagatgttgagctattttgtcgcgttc
tttactaacaccaccatgaactggggaatggcggccgcgttagggacacaactgctgatt
atcgtgacgctactgtacgtggtgtacatccgggtaacgcgaaccaatgcggaagccgcg
gcgcactag
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