Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2549
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Entry
PC1_2549 CDS
T00934
Name
(GenBank) OmpA domain protein transmembrane region-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_2549
Transporters [BR:
pct02000
]
Other transporters
Pores ion channels [TC:
1
]
PC1_2549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Porin_1
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
ACT13580
UniProt:
C6DKX9
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All DBs
Position
2913524..2914624
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AA seq
366 aa
AA seq
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MKKTAIAVAVALASFATIAQAAPKDNTWYTGGKLGVSQFHDTGFYGNGYTGVNNNPIKSK
LGAGAFVGYQANPYLGFELGYDWLGRMKYAGSTSSAADSASFKAQGIQLAAKLSYPVLPD
LDVYTRLGGMVWRADSHAATSVNTGTRADITNDDTGVSPLAAIGVEYAIDKNWATRVDYQ
WVSNIGDAGTVGARPDNMLMSVGLSYRFGQDDRVAPVVAPAPTPAPAPVVETKRFTLKSD
VLFNFNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRAQS
VVDYLVSKGIPANKVSARGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIKDV
VTQPQA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagctatcgcagttgcagtggcactggctagcttcgcgactatcgcgcaa
gcagctcctaaagacaatacctggtacaccggtggtaaactgggtgtgtctcaattccac
gatactggtttctacggaaatggttacaccggtgtcaacaacaacccaatcaaaagcaag
ttaggcgctggtgcatttgttggttatcaagccaacccgtacctgggttttgaactgggc
tacgactggctgggccgcatgaagtatgcaggttctacttctagcgcagcagacagcgcg
agcttcaaggcacagggcatccaactggctgctaaactgagctacccagttctgccagat
ctggacgtttatactcgtctgggtggtatggtatggcgtgctgatagccatgcagcgact
tctgtaaataccggtacacgcgctgacatcaccaacgacgacaccggcgtttctccgctg
gctgcgatcggtgttgaatacgctatcgacaaaaactgggctactcgtgttgactaccaa
tgggtaagcaacattggtgatgctggtaccgttggtgcccgtccagataacatgctgatg
agcgttggcctgtcttaccgtttcggccaggatgaccgtgtagctccagttgttgctccg
gcgccaactccagctccggctccagttgttgaaaccaagcgtttcacgctgaaatctgac
gtcctgttcaacttcaacaaagcaacgctgaaagcagaaggccagcaatcactggatcaa
ctgtacactcagctgagctctctggatccaaaagatggttccgttgttgttctgggcttc
actgaccgtttaggttcagagcaatacaaccaaggcctgtctgaaaaacgtgcacagagc
gtcgttgattacctcgtttctaaaggtatccctgcgaacaaagtctctgctcgtggcctg
ggcaaatctcaacctgttaccggttctacctgtgacaacgtgaaacctcgtgctgcgctg
atcgactgcctggcaccggatcgtcgcgtagagatcgaagttaaaggcatcaaagacgtt
gtaactcagcctcaggcttaa
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