Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2561
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Entry
PC1_2561 CDS
T00934
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02020
Two-component system
pct02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PC1_2561
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PC1_2561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pct03021
]
PC1_2561
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pct02035
]
PC1_2561
Transcription machinery [BR:
pct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PC1_2561
Bacterial motility proteins [BR:
pct02035
]
Flagellar system
Flagellar assembly proteins
Stator
PC1_2561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
GerE
DUF2730
TgpA_N
Motif
Other DBs
NCBI-ProteinID:
ACT13592
UniProt:
C6DKZ1
LinkDB
All DBs
Position
complement(2928196..2928918)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGTMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLSAVERYD
SLQGTAFTTYAVQRIRGSMLDELRSRDWAPRSVRRNAREVAQAMQQAEQQLGRTPTEQEV
AQALNITLEDYRQILLDTNNSQLFSYDEWREEHGDSAEALLEGNEDANPLHQLMEGNLRH
RVMDAIESLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRVKLMNDV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatttgtataccgccgaaggcacaatggataaaaattccctttggaagcgctat
gttccactagtgcgccatgaagccttgcgtttacaggttcgtctccccgcgagtgttgag
cttgacgatctgctacaggctggtggtatcggtttgctcagtgcagtcgagcgttatgat
tcgttgcaaggtacggcgtttactacctatgccgttcaacgaatccgcggttcgatgctg
gatgaattacgcagtcgtgattgggctccacgcagtgtacggcgtaatgcgcgggaagtg
gcacaagcaatgcagcaggctgaacaacagctcggtcgtactccaacagagcaggaggtt
gcgcaggccctgaatatcacacttgaggattatcgtcagatattgctggatacgaacaac
agccagcttttttcttacgatgaatggcgtgaggaacatggtgatagcgcagaggctcta
ctggaaggcaatgaagatgcgaatccattgcatcaattgatggaaggcaatttgcgccat
cgtgtgatggacgcgattgaaagcctgccagagcgtgagaaattggtattgacgctttac
tatcaggaagagttgaacctgaaagaaatcggtgccgttctcgaagtcggggagtcgaga
gtcagtcagttgcatagccaggcgataaagcgcctgcgcgtgaaattaatgaacgatgtt
taa
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