Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2821
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Entry
PC1_2821 CDS
T00934
Name
(GenBank) fatty acid oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00071
Fatty acid degradation
pct00280
Valine, leucine and isoleucine degradation
pct00310
Lysine degradation
pct00362
Benzoate degradation
pct00380
Tryptophan metabolism
pct00410
beta-Alanine metabolism
pct00640
Propanoate metabolism
pct00650
Butanoate metabolism
pct00907
Pinene, camphor and geraniol degradation
pct00930
Caprolactam degradation
pct01100
Metabolic pathways
pct01110
Biosynthesis of secondary metabolites
pct01120
Microbial metabolism in diverse environments
pct01200
Carbon metabolism
pct01212
Fatty acid metabolism
Module
pct_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PC1_2821
00650 Butanoate metabolism
PC1_2821
09103 Lipid metabolism
00071 Fatty acid degradation
PC1_2821
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PC1_2821
00310 Lysine degradation
PC1_2821
00380 Tryptophan metabolism
PC1_2821
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PC1_2821
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PC1_2821
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PC1_2821
00930 Caprolactam degradation
PC1_2821
Enzymes [BR:
pct01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PC1_2821
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PC1_2821
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PC1_2821
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ACT13851
UniProt:
C6DAL7
LinkDB
All DBs
Position
complement(3193804..3195987)
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AA seq
727 aa
AA seq
DB search
MNDQQPFSAITESPSAFSLTIRPDNIGVIGIDVPGEKVNTLKSEFAQQILSVFEQARQHA
TLRGLILISSKPDSFIAGADITMLNQCRSAEQAENLAKQGQETFEQIAALPFPVVAAIHG
ACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLDSALDLILT
GRHLRANQALRQGLVDEAVPHDILLDTAVEMLKKGKRKAEPLGWRSRLLSSPGIRHVLFK
MVKRKTRAKTHGNYPATEKIIQVVRRGVEKGREEGYRQEARAFGKLVMTPESAALRHLFF
ASNALKKTSGAASDAKPIHYVGILGGGLMGGGIASVTATRGQLPVRIKDINEQGINHALK
YNWQLLTQRVQRKRMKPTERQRLMTLISGSTDYRGFEHADIVIEAVFEDLALKRQMVAEI
EDHAAPHTIFASNTSSLPIHQIAEGARRPQQVIGLHYFSPVDKMPLVEVIPHAHTSAETV
ATTVALARKQGKTAIVVGDSAGFYVNRILAPYINEAAYCLLEGEPIESIDYALVRFGFPV
GPFALLDEVGIDVATKIVPVLSEELGTRFTSPPAFDAILKDGRKGRKNGKGFYRYNKTRR
FWQTGREVDSSIYPLLDVTAKAHIDPALISQRGVMMMLNEAARCLDEGVIQCARDGDIGA
VFGIGFPPFLGGPFHYMDRLGMETVVKTLLVLQQQYGDRFAPCERLLAMREGQRTFYPPT
DEDDSAS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaacagcctttctctgccataacggaaagcccctctgccttttccctcacg
attcggccggataatatcggcgtgatcggcattgacgttcccggcgagaaggtaaacacg
ctaaaaagcgaatttgcacagcagattctttcggtcttcgagcaagcgcgacaacatgcg
acgctcagggggctgatcctgatttcctccaaacctgattcgtttatcgcgggtgcggac
atcaccatgttgaaccagtgtcgcagtgctgaacaggctgaaaatctggcaaagcagggg
caggaaacctttgagcagattgctgcattaccgttccccgtggtggccgcgattcacggc
gcttgtctgggcggcgggctggaactggcattagcctgcgattatcgcgtttgttcgctg
gatgaaaaaacggtgctggggttaccggaagtgcagcttggactccttcccggatcaggc
ggaacgcagcgtttgccgcggttgattggtctggatagcgcgctcgatctcattctgacc
ggtcgccatctccgcgcgaatcaggcgttacggcagggactggtcgatgaggccgttccg
cacgatattctgctggataccgcagtcgagatgctcaaaaaaggaaaacgtaaagcggag
ccgctaggctggcggtcgcgcctgctgagcagtccgggcattcgccatgtacttttcaag
atggtgaagcgtaaaacccgtgcgaaaacacacggcaactatccggccactgaaaagatt
attcaggtcgtgcgccggggagtggaaaagggtcgtgaagaaggataccgacaggaggcg
cgggcgttcggtaagctggtgatgacgccggaatctgccgcgctacgccatttgttcttt
gcttccaacgcattaaagaaaacctctggtgcagcctctgacgcgaaaccgatccactac
gtcggcattcttggcggcgggttgatgggaggagggatcgccagcgtgacggcgacgcgc
gggcagttgccggtgcggattaaagatatcaatgagcagggtatcaaccatgcgttgaag
tacaactggcaactgttgacccagcgcgttcagcgtaaacggatgaagccgacggagcgt
cagcggttgatgacgttgatttccggcagtacggattatcgcgggtttgaacatgcggat
attgtcattgaggccgtgttcgaagatctggcgctgaagcggcaaatggtggcggagatt
gaagatcatgccgcaccgcatacgattttcgcatccaacacctcatcgctgccaatccat
cagattgcggaaggcgcgcgccgtccacagcaggttattgggctgcactattttagtccg
gtagacaaaatgccgctggttgaagtgattccccatgctcataccagtgccgaaacggtg
gcgacgacggttgctctagccagaaagcagggaaaaaccgcgatcgtcgtgggtgacagc
gccggtttttatgtgaaccgcatattggcaccttatatcaatgaagcggcttactgcctg
ctggaaggcgagccaattgaatcgatcgactatgcgctggtgcgctttggtttccccgtt
ggtccgtttgcgctgcttgatgaagtgggcatcgatgtcgcgaccaaaattgtgccagtg
ctaagtgaagaactgggcacacgtttcacctctccgcctgcgtttgatgcgatcctgaaa
gatgggcgcaaagggcgtaagaatgggaaagggttctatcgatacaataaaacgcgccgt
ttctggcagacggggagggaggttgatagctcaatttacccgctgctggatgtgacggca
aaggctcacatcgaccctgcgctaattagccaacgtggcgtaatgatgatgctgaatgag
gcggcgcgttgcctggatgaaggtgtgattcaatgtgcgcgcgatggtgatatcggggcg
gtctttggtattggtttcccaccgtttcttggcggaccgttccactacatggatcgtctg
gggatggaaaccgtcgtgaaaacactactggtgctgcaacaacagtatggcgatcggttc
gcgccctgtgagcgtttgcttgcgatgcgggaaggtcagcggacgttttatccgccaacc
gatgaggacgatagcgctagttaa
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