Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2924
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Entry
PC1_2924 CDS
T00934
Name
(GenBank) glycosyl transferase family 39
KO
K07264
4-amino-4-deoxy-L-arabinose transferase [EC:
2.4.2.43
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00540
Lipopolysaccharide biosynthesis
pct01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PC1_2924
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PC1_2924
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pct01005
]
PC1_2924
Enzymes [BR:
pct01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.43 lipid IVA 4-amino-4-deoxy-L-arabinosyltransferase
PC1_2924
Lipopolysaccharide biosynthesis proteins [BR:
pct01005
]
Lipid A
PC1_2924
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_2
Motif
Other DBs
NCBI-ProteinID:
ACT13947
UniProt:
C6DAW3
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All DBs
Position
complement(3296347..3298017)
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AA seq
556 aa
AA seq
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MEKGMIKLKSTVILVLFALLYLLPLNGRWLWSPDETRYAEISREMLQRGDWIVPHLLDVR
YFEKPVAGYWLNNISQWLLGHTNFSVRFASVFSTALSALLVFWLALLLWKNRRTALLAAT
IYLTSLLVYGIGTYSVLDPMVTLWMTAALFSHVLIQRATLTRERLMAWGLMGLACGMGFM
TKGFLALALPVISVLPVALAQKRIKELLLFGPLAIVVAVLLSAPWALAVHAREADYWHYF
FWIEHIQRFAEDDAQHNAPFWYYLPVLIVGTFPWLALLPGALRSGWAERKSSPERFLLLC
WMVMPLLFFSIAKGKLLTYILPCFAPLALLMAAWISGLAPAVRDRLLRINSWLNLAFGSV
LALAVAALGLGIIMPHLYQPGEGLTIVSGVVCFVGWVAFAAVSLKKSRSWGYLVAGCPLF
LALLVGGSIPASVVDSKNPQTFIRSHQPLLEDSRYVLSDEVGLAAGLAWELKRSDITLFK
ARGELNYGLNYADAADRFVDEGAFPAWLAEKRRSGNVALVLKIDRDTDEEYRNLPAPDQL
KKSHRYVLLFYKQIAP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcatgataaagctgaaaagtaccgtaatactggtgctatttgctttgctc
tacctgttgccgcttaacggccgctggctgtggtcaccggatgaaacgcgctatgcggaa
atcagccgcgagatgcttcagcgcggtgattggatcgtgccgcatttgctggacgttcgc
tactttgagaagcctgttgcaggctactggctgaataacatcagtcagtggttactgggt
cataccaatttttctgtgcgctttgcctcggtattttctactgccttgagcgcgctgctg
gtgttttggctggcgctgctgctgtggaaaaaccggcgtactgcgctgctggcggcgacg
atctatctgacgtcactgcttgtgtatggtattggcacgtacagcgtgctcgatcccatg
gtgacgctctggatgacggcggcgctgttcagccacgtgctgattcagcgcgctacgctg
acgcgtgaacggctgatggcctggggactgatggggctggcctgcggcatggggtttatg
accaaaggttttctggcgctggccttaccggtcatcagcgtgctaccggtagcgctggcg
caaaagcggattaaggaattgctgctgttcgggccgctggcaattgttgtcgcggtattg
ctgagtgcgccgtgggcgctggcggtgcatgcgcgagaagccgattactggcattacttc
ttttggattgaacatattcagcgctttgcagaagacgacgcgcagcataacgcgccgttc
tggtattacctgccagtgctgattgtcggcacattcccctggctggcgctgctaccgggc
gcattgcgcagcggttgggcggaacgaaagtcctccccggaacggttccttctgctgtgc
tggatggtgatgccgctgctgtttttcagcatcgccaaaggcaagctgttaacctacatc
ctgccgtgctttgcgccgctggcgctgctgatggcggcgtggatttccgggctggcccct
gcggtacgcgaccgtctcttgcgcatcaatagctggctcaatcttgcgttcggcagtgtg
ctggcgctcgccgttgcggcgctgggcctcggtatcatcatgccgcatctctatcagcca
ggggaagggttgaccatcgtatcgggtgtcgtctgttttgtcggctgggtggcttttgcc
gcagtcagcctgaaaaagtcgcgatcgtggggctatctggtggcaggctgtccgttattt
ttggcgctgctcgtcggcgggagtattccggcgagtgtggttgattcaaagaatcctcaa
acctttattcggagtcatcagccattgctggaggacagccgctatgtgctgagcgatgaa
gttgggctggctgccgggctggcgtgggagcttaagcgtagcgatatcaccttatttaag
gcacggggtgagctgaactacgggctgaactatgcggatgccgccgatcgctttgtggat
gagggggctttccctgcctggcttgctgagaagcggcgtagcggaaatgttgcgttggtg
ctgaagatcgatagagataccgatgaagaataccgcaacctgcctgcacccgatcagttg
aaaaaatcgcaccgctacgtgctgttattttataagcagatagcgccatga
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