Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3053
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Entry
PC1_3053 CDS
T00934
Name
(GenBank) Lytic transglycosylase catalytic
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pct01011
]
PC1_3053
Enzymes [BR:
pct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PC1_3053
Peptidoglycan biosynthesis and degradation proteins [BR:
pct01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PC1_3053
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ACT14076
UniProt:
C6DBL3
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All DBs
Position
3444560..3446086
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AA seq
508 aa
AA seq
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MPPLWEMTYKKTAVTDRQATRPPRDNYLKPLKLNYFFIGIITLLLALALWPSIPWRSSQD
AQLRQILSRGELRISTVNSPLTYAMSNGSPTGLDYELAKRFADYLGVKLVVSSRKNLDEL
FDDLDGDDADLLAAGLIYNHERLERFRAGPTYYSISQQMVYRLGSPRPKTLDKLQGRLVV
TSGSAHAATLRDLKAEKYPQLNWESASDQSTQELLKQVADGKLDYTLGDSVTIGLMQRIH
PQLAVAFDLSDEEPVTWYMRRSHDDSLSAALLDFFSQIVEDGTLARLEEKYLGHVGEFDY
VDTTTFLSAIDETLPDLRPLFEKYATEIDWKLLAAISYQESHWNPQATSPTGVRGLMMLT
RNTAESLNVTDRVDPEQSIRGGAQYMSHMMQKMPDTIPEDEKIWFALASYNMGYAHLLDA
RKLTEKQKGNPDSWVDVKMRLPMLSQKRYYTQTTYGYARGHEAYNYVENIRRYMVSLEGY
LIEKETKAQQQTQIAQGYPVVPLNKVPE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcccccactctgggaaatgacgtataaaaaaactgccgttacagacagacaggccaca
cggccgccgagagataactatttgaagcctttaaaattaaattattttttcatcgggatt
atcacgttactgctggcgttagcgctatggcctagtattccctggcgcagtagccaggat
gctcagctcaggcagatcctctcacgcggtgagttgcgtatcagtacggtcaattcaccg
ctgacttatgcaatgagcaacggatccccgacaggtctggattatgaactggcaaaacgt
ttcgccgactacctcggcgtcaagctggtggtctcgtcacgtaagaaccttgacgaactg
tttgacgatctggacggtgacgatgccgatctgctggccgcagggctgatttacaaccat
gagcgtctggaacgtttccgtgctggcccaacctactattccatttcacaacagatggtc
taccgcctcggttcgcctcgtccaaaaacgctggataagctgcaaggccgactcgtcgtt
acatccggttcagcgcacgcggcgaccctgcgcgatctcaaggcagagaaatacccgcag
ctcaactgggaatcggcctccgaccagagcacgcaagaattactcaagcaggttgctgac
ggcaagctggactacacgctgggggattccgtcaccattggcttgatgcagcgaattcat
ccgcagctcgccgtcgccttcgatctcagtgacgaagagcccgtcacctggtatatgcgc
cgttcgcacgatgacagcctatctgccgcgctgctggacttcttcagccagattgtcgaa
gacggcacgctcgcgcgtctggaggagaaatatctcggccacgttggtgagtttgactat
gtcgataccaccacattcctgagtgcgattgatgaaacgttgccggatttacgccctcta
tttgaaaaatacgccaccgagatcgactggaagctgctggccgccatctcctatcaggag
tcacactggaacccacaggcgacatcaccgaccggcgtgcgtgggctgatgatgctcaca
cgcaacaccgcagaaagcctgaacgtgaccgatcgcgtcgacccggaacaaagcattcgc
ggcggcgcgcagtacatgtcgcatatgatgcagaaaatgccggacaccatcccggaagat
gaaaaaatctggtttgcgctggcgtcctacaacatggggtacgcccatctgcttgacgcg
cgtaaattgactgaaaaacagaagggtaaccccgatagttgggttgatgtgaagatgcgt
ctgccgatgttgagccaaaagcgctactacacgcaaaccacctacggctatgcacgcgga
catgaagcctataactacgtggaaaacattcgacgttatatggtgagtctggaaggttac
ctgatagagaaagaaacgaaagcgcaacaacagactcagatagcacaaggctacccggtc
gttcctctcaacaaggtgccggaataa
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