Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3069
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Entry
PC1_3069 CDS
T00934
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PC1_3069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_3069
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PC1_3069
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PC1_3069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ACT14092
UniProt:
C6DBZ8
LinkDB
All DBs
Position
complement(3476522..3477259)
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AA seq
245 aa
AA seq
DB search
MEGWQRAFVLHGRPYSETSLLLDLFSESDGRVRVLAKGARARRSSLKGCLQPFTPLLVRW
SGRGEVKTLRSAEPVSLALPLTGSMLYSGLYVNELLSRVLEHETNYSALFFDYLHCLQHL
AAQDASPEPALRRFELALLGYLGYGVDFLHCAGSGEPVADTMTYQYREERGFIASLVVDN
KSFTGHELRSLASREFPDNGTLKAAKRFTRIALKPYLGGKPLKSRELFRQFVPAANLSKP
TSSDK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctggcagcgcgcatttgtcttacatgggcgaccttatagtgaaaccagctta
ttgctggatctgtttagcgaaagcgatggtcgcgtgcgcgtgcttgccaagggcgcgcga
gcccgtcgctctagtctgaaagggtgtttgcagcctttcactccgctgctggtgcgctgg
agcggtcggggagaagtgaaaacattacgcagcgccgagcccgtttcgcttgcactgccg
ttaacggggtcgatgctttatagcggtttatacgttaacgagctgctgtctcgcgtgctg
gaacatgaaaccaattactccgctctatttttcgattatctccattgtttacaacatctt
gctgctcaggatgcgtcacctgaacccgcattaaggcgctttgaattagcgttgctgggt
tatttgggatacggcgttgatttcctgcattgtgccggtagcggtgaacctgtggccgat
accatgacctatcaatatcgagaggaaaggggatttattgccagcctggtggtcgataat
aaaagctttaccggtcatgagttacgttcgctggcatcgcgtgaatttcctgataacggt
acactgaaggcggcaaagcgtttcactcgcatcgcattaaagccgtatctgggggggaaa
ccgttgaaaagtcgcgaactgttccgtcagtttgttcctgctgctaatttgtccaaaccc
acgtcttctgataaataa
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