Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3095
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Entry
PC1_3095 CDS
T00934
Name
(GenBank) transcriptional regulator, CdaR
KO
K02647
carbohydrate diacid regulator
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_3095
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
Other families
PC1_3095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ACT14118
UniProt:
C6DC24
LinkDB
All DBs
Position
complement(3504829..3505986)
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AA seq
385 aa
AA seq
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MASYHLNAKMAQDIVARTMQIIDSNINVMDARGKIIGSGDQERLGELHEGALLALSQGRV
VDIDDAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRTDDLSPALMEWAQRLGIDLNKPRVAAVIEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDAEDHRRRVDTLMSRMAE
SSRLRVRLALGNYFAGPGSIARSYRTARTTMSVGKQRMPAQRCYYYQDLMLPVLLDSLRG
GWQANELVRPLSKLKAMDGNGLLRRTLGAWFRNNVQPGATAKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDEEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatcatctcaatgccaagatggcacaggatattgtcgcgcggaccatgcag
atcattgatagcaatatcaacgtgatggatgctcgcggtaagattatcggcagtggcgat
caggaacgattgggggaactgcacgaaggggcgctgctggcactttcgcaggggcgagtc
gttgatattgatgatgccgtggcgcgccacctgcacggcgtccgtccggggatcaattta
cccttgcgcatcgacggtgaaatcgttggtgttatcggtttaacgggtaatcccagccag
ctgcgacagtacggcgaactggtctgtatgacggcggaaatgatgctggaacaggcgagg
ttgttgcatatgctggcgcaggatagccgtctgcgtgaagagttggtgttgaacctgatc
cgtactgacgatctttctcccgccctcatggagtgggcgcagcgcttaggcatcgatctg
aataagccacgcgtcgcggcggtgatcgaagtggacagcgggcagctcggggtggattcc
gccatggcggagctacagcagttgcagacgctgctgaccacgccggaacgtgacaacctg
atcgcgatcgtttccctgacagaaatggtggtgctaaaaccggcgttgaacagccacggg
cgttgggatgcagaagatcatcggcggcgggtggatacgctaatgtcgcgcatggcggaa
agcagccggttgcgggtgcggctggcgttggggaactattttgctggccccggcagcatc
gcgcgttcctatcgcacggcgcgcacgaccatgagcgtgggcaaacagcgtatgcctgct
cagcgctgttattactatcaggatctgatgttacccgtactgctggatagcctgcgcggc
ggttggcaggcaaatgaactggtgcggccactctcgaagcttaaagcgatggacggcaat
ggtctgctgcgccggacgctgggtgcctggttccgtaataacgttcagccaggagcgacg
gcgaaagcgctatttattcaccgcaatacgctggagtatcgcctcaatcgcatctctgag
ctgacggggttagatctggggaatttcgacgaccgtctgttgctgtacgtggctttgcag
ttggatgaagaagagtag
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