Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3110
Help
Entry
PC1_3110 CDS
T00934
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00550
Peptidoglycan biosynthesis
pct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PC1_3110
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pct01003
]
PC1_3110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pct01011
]
PC1_3110
Enzymes [BR:
pct01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PC1_3110
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PC1_3110
Glycosyltransferases [BR:
pct01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PC1_3110
Peptidoglycan biosynthesis and degradation proteins [BR:
pct01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PC1_3110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
PBP1b_C
UvrB_inter
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ACT14133
UniProt:
C6DC39
LinkDB
All DBs
Position
complement(3522510..3524990)
Genome browser
AA seq
826 aa
AA seq
DB search
MSRDDREPIGRKGKAPKRKPERKQAIRRRRDDDYDDDDYDDYQDDYDDDDDDDGDDTMTR
KSQRRRRWLGLAIKLFLIFAVAMAIYGVYLDSQIRSRIEGKVWQLPAAVYGRMVNLEPGM
AYSQKEMISLLEGMQYRQVSRITRPGEFSVRGNSIDMLRRPFDFPDGKEGQIQARLTFAN
DRLSQIQNLDNQRNFGFFRLDPKLITMMQSPNGEQRLFVPRSGFPDLLVDTLVATEDRHF
YEHDGISLYSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIM
DYRYSKDRILELYLNEVYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQALLVGMVKGA
SLYNPWRNPEITLERRNLVLRLLQNQQVIDADLYNMLSARPLGVQPKGGVISPQPAFMQL
VRQELQQRLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEVGVPALRAGRNVSDLEAAMVIV
DRFSGEIRAMVGGSQTQYAGFNRALQARRPVGSLAKPPTYLTALSQPDTYRLNTLLADEP
LSIKQANGQLWQPKNYDREFRGRVMLVDALANSLNVPTVNLGMAVGLDQITATLKRLGIP
ENVIQPVPAMLLGAISLTPMEVAQEYQTIASGGNRAPLSSLRSVIAEDGTVLYQSFPQAE
RAVPAQAAYLTLYGMQQVVERGTSRSLAVKFPNYHLAAKTGTTNDLRDSWFAGIDGKEVA
ISWVGRDNNGPAKLTGANGALTIYRRYLENQTPLPLMLTPPEGITTMTVDASGNFICNGS
SAGRVLPVWTDNPQALCQASQPQPSPQQGQQDGEGVADWIKQMFGQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatgaccgcgaacctatcggacgtaaagggaaagcgccaaaacgtaagcct
gaacgcaaacaggccatacgacgtcgcagggatgacgactatgatgatgatgactatgac
gattatcaggacgactatgacgacgatgatgacgacgacggcgatgacaccatgacgcgg
aaatcgcagagaagacggcgctggctggggctggctatcaagctgttcctgatctttgcc
gtcgcgatggcaatctatggcgtgtatctcgacagccagatccgcagccgtattgaaggc
aaagtctggcagttgcccgccgccgtctatggccgtatggtcaaccttgagccgggtatg
gcctatagccagaaagagatgatcagcctgctggaaggtatgcaataccgtcaggtgagc
cgcattacccgtccaggtgaattcagcgtgcgcggcaacagcatcgacatgctgcgccgt
ccgtttgatttccctgatggaaaagaagggcagattcaggcgcgcctgacgtttgccaac
gatcgtctgtcgcagatccagaatctggataatcagcgcaacttcggctttttccgtctc
gatccaaaactgatcaccatgatgcagtcaccgaatggcgaacagcgtttattcgtgccg
cgttccggcttccccgatctgctggttgatacgctggtcgcgaccgaagaccgccatttt
tatgaacatgatggcattagcctgtactcgattggccgtgcgtttttagccaacatcacg
gcaggacgcgcggtacagggcggcagtacgctgacgcagcagttggttaagaacctgttc
ctgactaatgagcgttcgctgtggcgtaaagctaacgaagcctatatggcgctgatcatg
gattatcgctacagcaaggatcgtatccttgagctgtaccttaacgaggtgtacctcggt
cagagcggtaacgatcagatccgcggcttcccgcttgccagcctgtactattttggtcgt
ccggtgaatgaactgagtctcgatcagcaggcgctgctggtgggcatggtgaaaggggcg
tcgctgtacaatccgtggcgtaatccggagattacgttagagcgacgcaatctggtgctg
cgtctgttgcagaatcagcaggtgattgatgcagatctgtacaacatgctgagcgcgcgt
ccgctgggcgtccagccgaaaggcggcgtcatcagccctcagcccgcgtttatgcaactg
gtgcgtcaggaactgcaacagcggcttggcgacaaggttaacgatctctccggcgtgaag
atctttaccacgctcgatccggtctcgcaggatgcggcagaaaaagcggtagaggtcggc
gttccggcactgcgcgcaggccgtaacgtgagcgatctggaagcggcgatggtgattgtc
gatcgttttagcggcgaaattcgcgcgatggttggcggttctcaaacgcagtacgccggg
tttaaccgtgcgttacaggcgcgtcgtcccgtcgggtcgttggcgaagccgccgacctat
ctgaccgcgctgagccagccggacacttatcgtctgaacaccctgctggcggatgagccg
ctgtcgatcaagcaagctaacggtcagctatggcagccgaagaactacgatcgtgagttc
cgcggccgtgtcatgctggtcgatgcgctggcgaactcgctgaacgtcccgaccgttaat
ctggggatggctgtgggtctggatcagatcacggcaacgctgaagcgtctggggatcccg
gaaaacgtgattcaacctgtaccggcgatgctgctgggggcgatcagtctgacgccgatg
gaagtggcgcaggaataccagacgatcgccagcggcggcaaccgtgcaccgctttcctcg
ctgcggtcagtgattgcggaagatggcacggtgctgtaccagagcttcccgcaggctgaa
cgggcggttcctgcacaggcggcctatctgacgctgtatggtatgcagcaggttgttgaa
cgcggtacgtcacgttcgctggcggtgaaattcccgaattatcatctggcggcgaaaacg
gggactaccaatgacctgcgtgatagctggtttgccggaatcgacggtaaagaagtggcg
attagctgggtagggcgcgataacaacggcccggccaagctgacgggggcgaacggtgcg
ctgacgatttatcgtcgctatctggaaaaccagacgcctctgccgctcatgttgacgccg
ccggaaggcatcacgaccatgacggtggatgccagcggtaactttatctgtaacggcagc
agtgccggacgtgtcttgccagtctggacggataacccgcaggcgctgtgtcaggctagc
cagccgcagccttccccacagcagggacagcaagatggagaaggcgtcgccgactggatc
aaacaaatgtttggtcaataa
DBGET
integrated database retrieval system
