Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3135
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Entry
PC1_3135 CDS
T00934
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03030
DNA replication
pct03430
Mismatch repair
pct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC1_3135
03430 Mismatch repair
PC1_3135
03440 Homologous recombination
PC1_3135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pct03032
]
PC1_3135
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_3135
Enzymes [BR:
pct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC1_3135
DNA replication proteins [BR:
pct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC1_3135
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC1_3135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACT14158
UniProt:
C6DC64
LinkDB
All DBs
Position
complement(3549627..3550364)
Genome browser
AA seq
245 aa
AA seq
DB search
MSTEITRQIVLDTETTGMNMLGVHYEGHKIIEIGAVEVINRRLTGRHFHVYIKPDRLVDP
EAYNVHGISDEFLADKPTYADIVDDFLDFIRGAELVIHNATFDIGFMDYEFRLLNRDLPK
TETFCKITDSLLMARKIFPGKRNSLDALCDRYQIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLTFSMEGETQQKNENTETIQRIVRPQSALKVLYADEAELVAHEQRLDLIAKKGGSC
LWRAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgaaattacgcgacaaatcgtcctggatacagaaaccaccggtatgaatatg
ctgggggttcactacgaagggcataaaattatcgagatcggtgcggttgaagtgatcaac
cgccgcctgacgggccgtcattttcacgtctatattaaacccgatcgtttagtggatccc
gaagcgtataacgtgcacggtatcagcgatgagtttcttgccgacaaaccgacgtatgcg
gatattgtggatgatttcctcgattttatccgtggcgcggaactggtcatccataacgca
acgtttgatatcggctttatggattatgaatttcggttgctgaaccgagatcttcccaag
acagagacgttttgtaagatcaccgatagcctgcttatggcgcggaagatcttccccggt
aagcgtaacagtttggatgcgctctgcgatcgctatcagatagataacagcaagcgtacg
ctgcacggcgcattgctcgatgccgagattctggctgaagtttatctggcgatgactggt
ggtcaaacgtctctgactttctccatggaaggtgaaacgcagcagaagaacgagaatacc
gaaacgatccagagaattgtccgccctcaatcggcgttaaaggtgctttacgccgatgaa
gctgagctagtcgcgcatgaacagcgtctggatttgattgctaaaaaaggcggtagttgc
ctgtggcgagcggaataa
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