KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3238
Entry
PC1_3238          CDS       T00934                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PC1_3238
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pct02044]
    PC1_3238
Secretion system [BR:pct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC1_3238
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: ACT14258
UniProt: C6DCT3
LinkDB
Position
complement(3647323..3649359)
AA seq 678 aa
MANSTGLQFTVKVGALAAGTFAVVDFRLDEGLNRPFSLSLSLASAQPDVDFGAVLDQPCE
LMIWYEGELKRRVSGIVSGFTQGDTGFRRTRYQIEVRPALWRLGLRTNARIFQAQKPEAI
ISMLLEEAGITDYAFALRNEHAVREYCVQYRESDLAFITRLAAEEGMYFFHEYEEGKHRV
VFADDAGALTKGPELFFNLATQGLSEGEYVRRFHYAERVSTAEVELKDYSFKTPAYGLSH
KKMSGELEHQRESYQHYDYPGRYKQDPSGKAFSGYRLDALRSGAVTSEGESNCAGLMPGS
TFTLTEHPNATLNAVWQTVSVTHVGQQPQALEEESGGEPTTMSNSFAVVKGTTTWRAAMP
YKPMVDGPQIATVVGPTGEEIYCDPYGRVKLQFPWDRYGASNDQSSCWVRVSQGWAGGQY
GMIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPTPYVLPAHKTRTTLRTDTHKGSGF
NELRFEDEATREQIYYHAQKDMDGVINNIHRQSVGRDQHLSVDQDQFQRVTRHRHRTIGK
DDFENIGQDHHQEIGRSFIQKIGASFKRFIGGGEITRIEGSRQTTMSGSEETLIGAHQRV
LVNTDSYLKAADIVLEAGQALTIKAPGGFIKIDSAGVTISGTIVKINDGGAAGVGTAPVS
ITPEDPTKPTLPDAPDRR
NT seq 2037 nt   +upstreamnt  +downstreamnt
gtggcaaacagtacaggattacagttcaccgttaaggtcggtgccctggcggcaggcact
tttgcagtagtggatttcaggttggatgaaggattgaaccggcctttcagcctgtcgctg
agtctggcgagtgcacagccggatgtcgatttcggcgcggtgttggaccagccgtgcgag
ctgatgatttggtatgaaggcgagctgaaacgccgggtcagcgggattgtcagtggcttc
acgcagggcgacaccggttttcggcgcacgcgctatcagatagaagttcgtccggcgctg
tggcgactggggctgcgcaccaacgcccgtatttttcaggcacaaaagccggaagccatt
atcagcatgctgctggaagaggctggcatcactgactacgcctttgcgctgcgtaacgag
catgcggtgcgggaatattgcgtgcagtaccgggaaagcgatttggcgtttatcacccgt
ctggctgcggaggaaggcatgtacttcttccacgaatatgaagagggcaaacaccgggtg
gtgtttgccgacgatgcgggggcgctgaccaaaggccccgagctgttcttcaatctcgcc
acgcaggggctgagcgagggcgaatacgttcggcgcttccactacgcagagcgggtgagc
acggctgaagtcgagctgaaagactatagcttcaagacgccggcttacgggctgtcgcac
aagaagatgagcggtgagctggaacaccagcgtgaaagttaccaacattacgactatccg
ggacgctataaacaagacccgagcggcaaggcgttcagcggctaccggctggatgcgttg
cggtctggagccgtgacgagcgaaggggaatccaactgcgcggggctgatgccgggcagt
acgtttaccctgacagagcacccgaatgcgacgctgaatgcggtgtggcagacggtgagc
gtgacgcacgtcgggcaacagccgcaggcactggaagaggaaagcggtggcgaaccaacc
acgatgagcaacagttttgcggtggtgaaagggacaacaacgtggcgcgccgcgatgccg
tataaaccgatggtggacggcccgcaaatcgccactgttgtcggtccgactggggaagaa
atctactgtgacccgtatggtcgggtgaaactgcaattcccgtgggacagatacggcgcg
agcaatgaccagagctcctgctgggtgcgggtgagtcagggctgggcgggcggtcagtac
ggcatgattgctatcccccgtatcggccatgaagtgatcgtcagcttccttgaaggtgac
ccggatcagccgattgtcaccgggcgtaccttccacgcgaccaatccgacaccgtacgtt
ttaccggcacataaaacgcgcacgacgctacgtaccgatactcataaaggcagtggcttc
aacgaactgcgttttgaggatgaggcgacgcgtgaacaaatttactatcacgctcagaaa
gatatggatggtgtcatcaacaacatccatcggcagagtgtcgggcgcgatcagcacctc
agcgtggatcaagatcagttccaacgggttactcgtcaccgtcaccgaacgataggtaag
gacgattttgaaaatatcggtcaggaccatcatcaggaaattggtcggagctttattcag
aagattggtgcgtcgttcaaacgtttcatcggcgggggagagattacccgtatcgaaggg
agtcggcagactacgatgtccggttctgaagagacgctgatcggtgcgcaccagcgtgtt
ctggtgaatacggacagctacctgaaagccgccgatatcgtactggaagcagggcaagcg
ttgaccatcaaggcgccgggcggttttatcaagattgatagcgcgggcgtgacgatttcc
gggacgattgtaaaaatcaacgacggcggtgcggctggcgtagggactgcgccggtatcg
attacgccagaagatccgacgaagcccacgctgccggatgcaccagacagacgttaa

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