KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3242
Entry
PC1_3242          CDS       T00934                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pct00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PC1_3242
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pct02044]
    PC1_3242
Secretion system [BR:pct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC1_3242
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF802
Other DBs
NCBI-ProteinID: ACT14262
UniProt: C6DCT7
LinkDB
Position
complement(3653515..3657012)
AA seq 1165 aa
MFKTIITFLRKQLPKLKPSWLLLGVLLWIVVLVLAWWLGPRLVVGESRPLQGIWGRVVFT
LVWLWLAFSYSAWMVWRRVQQMRAERHEQQVIEQDPLQVYVDSQQTFLDRWLEAFQTQLG
KRALYAMPWYLTIGLAGSGKSSLIHRANPANKMNPKLDAELRDVAAGQQVSSWVGESAVI
WDPSGQLLAQPELEGDSLGQRYARLWQHLLQWLSENRRRQPLNGLVLTLDISWLAQAGVA
DRKAYAQVMRARLQEISVNINTRLPVYIALTRLDMLSGFDKVYRQLNRDARQAVLGVTFT
PQASNGKGWLEELERFWDEWVTHLNDNLPDMLLTQSDRSVRNSLFSFVRQLAGVKDYVME
VLTETLATGEDRAFLIRGVYVSSVYQQGVPFDAFAQSASRRYQLPEPINPALRGESNTFF
VQRLFPDVIFPEASLAGENRLHSLYRRRRLSIGVGCMLLASLVLIGSWHHFYRVNEEAGR
NVLTKAQAFIGTNELEGQPGYGYQQLPRLNLIRDATLSFGNYHERTPMLADLGLYQGGKI
GPYVEGTYLQMLNQRFLPAVMQGLLEDLNQAPANSEQKLTILRVMRMLDDASGRNKSLVE
QFMAQRWQKAFPGQGNVQEQLMQHLDYALEHTDWHKAREQKDAVAISTFAPFNQPITLAQ
QELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDPVFSLRNDKAGSVPRLLTYPG
FSDYYLKQDKALLELTALDAWVLGQRERAQFSEADRREILRQVNDRYITDYINQWQKVLA
NIDVQTLDTPEQALDILTDITGNDQPFQRVLTTVSDNTRIRKLADDDNDTAQNINTRIGR
PFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNATDPGQAALKAVQARQGNKFAD
PVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWLDKVVTPFNEKLADRYP
FDPSSNKDVPLSEMEMFFMAGGTLDSFYQTNLKAMMESGMLEEGMASPLQAELVKQLERA
TRIRQTLFNAQGSLEVHFVLEPLELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNSMR
DGAESKLTLVPDDRERSPRSLSFSGPWAMFRLINSDQLTQVNENTFDVRFSLENGAMTYR
VYTDASHNPFAGGLFSQFTLPDSLY
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgtttaaaacaatcataacctttctacgcaagcagttgcctaaactgaaaccctcctgg
ctacttttgggcgtgctactgtggatcgtcgtgctggttctggcctggtggctgggaccg
cgtttggtggtgggcgaatcacgcccgttacagggaatctggggccgcgtggtgttcacg
ctggtctggctgtggctggcgttctcctatagtgcctggatggtctggcgtcgtgtgcag
cagatgcgtgcagagcgtcatgaacaacaggtaattgagcaggatcccctgcaggtgtat
gtcgatagccagcagacgtttctcgatcgctggctggaggcgtttcagacccaactgggt
aaacgcgcactgtatgcgatgccctggtatctgacgattggtctggctggcagcgggaaa
agcagcctgatccatcgtgccaacccggcaaacaaaatgaacccgaagctggatgcggaa
ctgcgagacgtggcggcaggccagcaggtgagcagttgggtcggtgagtctgccgttatc
tgggaccccagcggacagctactcgcgcagcctgaactggaaggcgattcactcggacag
cgttatgctcgactgtggcagcacctgctccagtggttgagtgaaaaccgccgccgccag
ccgcttaatggtctggtgctcacgctggatatttcctggctggcacaggctggcgtcgcg
gatcgcaaagcttatgcgcaggtcatgcgcgcgcgtttgcaggaaatttccgtcaacatc
aatacgcgtttaccggtgtatatcgcgctgacccggctggatatgctgagcggcttcgat
aaggtctatcgccagttaaaccgcgacgcgcgtcaggcagtattaggggtgacctttacc
ccgcaggcgagcaatggcaaaggttggctagaagagctggagcgtttctgggatgagtgg
gtcacgcacctgaatgacaacctgccagacatgctgctgacgcagtccgacagaagcgtg
cgcaattcgctgttctcgttcgtccgccaactcgctggcgtgaaagattatgtgatggaa
gtgctgacggaaacgttagcgacgggcgaggatcgcgcgtttctgatccgcggtgtctat
gtgagttctgtctatcagcaaggggtaccgttcgacgcctttgcgcagtcggcttcccga
cgctatcaactgcctgaaccgattaatcctgcgctgcgcggggaatccaatacgttcttt
gtgcagcgtcttttccctgacgtcatcttccctgaagccagtctggcaggtgaaaaccgg
ctgcatagcctctatcgtcggcgtcgactgagcatcggcgtaggttgcatgctgcttgcc
agtctggtgctgattggcagttggcaccatttctatcgggtcaatgaagaggccggacgt
aacgtactgacgaaagcgcaggcgtttatcggcaccaatgaactggaagggcagccgggc
tacggttatcagcagttgccgcggttgaatttgattcgcgatgcgaccttatcttttggt
aattaccacgaacgtacgccgatgctggccgaccttggcctgtatcagggcggtaagatt
gggccttatgttgaaggcacttacctgcaaatgctgaaccagcgctttcttccggcagtg
atgcaagggctgctggaggatttgaatcaggcgcctgccaatagtgagcaaaagctgacg
attctgcgcgtgatgcggatgctggatgatgcgtcagggcgtaataaatcgctggtcgaa
cagtttatggcgcagcgttggcagaaggcatttcccggtcagggcaatgtacaggaacag
ctgatgcagcatctggattatgcccttgagcacacggattggcacaaggcgcgtgagcag
aaagatgcggtagccatcagcacgtttgctccctttaatcagccgattacgctggcccag
caggaactgagcaagctgccgatgtatcagcgcgtttatcagagcctggtcatgaaggcg
acacaggtgttgccgccggatttagcgatccgtgatgaggttgggccgacctttgacccg
gtgttttccctgcgtaatgacaaagcgggaagtgtgccgcgactgctgacgtaccccggc
tttagtgattattacctcaagcaggacaaagccctgttagagctgacggcgctggatgcc
tgggtactggggcagcgtgagcgtgcgcagttcagcgaggccgatcggcgtgaaattctg
cgtcaggttaacgatcgctacattacggattacatcaaccagtggcagaaagtgctggcg
aacattgatgtgcagacgctcgatacgccggagcaggcgctcgatattctcacggatatt
accggcaacgatcagcctttccagcgcgtgctgacgacggttagtgataacacccgcatt
cgtaagctggccgatgatgacaacgacacggcgcagaacatcaatacgcggattggtcgt
ccgtttatgaccatcaacgcggcgctgagcggacgtggtgagcaagggccgctggtgcaa
gaggtcaatcagaagctgaccgatctctatcactatctcgatcagatcgttaacgcgacc
gatcctgggcaggcggcgttgaaagcggtgcaggcgcggcagggaaataaatttgccgat
ccggtattcgctttacagcaatacgcccgcagccttcccgcaccgctggatcgctgggtc
ggacagctcgccggagagagcgcgagtttggtgaccggactggcaatgtcgtcactgaat
caggaatggctggataaagtcgtgacgccattcaatgagaagctggcggatcgctatccc
ttcgacccgtcatcgaacaaggatgtgccgctgtcggaaatggaaatgttcttcatggct
ggcgggacgctggacagcttctatcaaaccaacctcaaggcgatgatggaaagcggcatg
ctggaagaaggcatggcgtcgccgttgcaggctgaactggtgaaacagcttgaacgcgcc
actcgcatccgccagaccctgtttaatgcgcagggcagtctggaagtgcatttcgtgctg
gagccgctggaactgacggcgaacaagcgccgcagcgtactcaatttggatggacaactg
ctggaatacagccacggtcgtcgccagaaaacgccgttggtatggccaaacagtatgcgt
gacggggctgaaagcaagctgacactggtgccggacgatcgtgagcgttcaccgcgcagc
ctgagctttagcgggccgtgggcgatgttccggttaatcaatagcgatcaactgactcag
gttaatgagaacacctttgacgtgcgtttctcgctggagaacggtgcgatgacgtatcgc
gtgtataccgatgccagccataacccgtttgccggtggtctgttcagccagttcacgctg
cctgactctctttattaa

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