KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3248
Entry
PC1_3248          CDS       T00934                                 
Name
(GenBank) type VI secretion protein, VC_A0114 family
  KO
K11893  type VI secretion system protein ImpJ
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:pct00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pct02044]
    PC1_3248
Secretion system [BR:pct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC1_3248
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: ACT14268
UniProt: C6DCU3
LinkDB
Position
complement(3663977..3665314)
AA seq 445 aa
MSSRNRIIWREGLFIKPQHFQQQQRHTDYALHARLSALSDYFYGLQSLAINEEYLNFGRI
ALVNASGVMPDGTVFNIPGDDALPLPLEITDVALANQKVYLALPLAVNGVSEVGQPGQGI
ASRLQSHRHDVRDLHSDGGDIVSLEVGKVSLRLMLDRDDRSAYASLAIANILDKRPDGGL
ILDPNFMPCSISVTAIPTLKRFLGESAGLVAERARSLAQRIAAPGQQGVADVAEFMMLQL
LNRAQPKLSHLARLGTLHPERLHETLVELCGELMTFTDESRLPPEFPAYRHEHQQASFEP
LMMALRQALSTVLSPRAVSIQLKKQPYGVMVAMVGDAELMTSAEFVLAVRARMPQEHLRK
QLLQQTKIASSEKIRELISLQLPGIPLLPLPVAPRQLPYHAGYSYFQLDRQSPAWQMLVS
GNTLAFHIAGEFPELDMQLWAIRGQ
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtcgagtcgcaatcgcattatctggcgggaaggcctgttcattaaaccgcagcatttt
caacagcagcaaagacacaccgattacgcactgcatgcgcgtctcagcgctctcagtgat
tatttctatggcttgcagtcgctggcgattaacgaggaatacctcaattttggccgtatc
gcgctggtgaacgccagcggggtgatgccggacggcaccgtgttcaatattccgggtgat
gacgctctgccactgccgctggaaattaccgatgtggcgctggcaaaccagaaagtgtat
ctggcgttgccgctggcggtgaatggcgtcagtgaagtcggtcagccggggcaggggatc
gccagccgcttgcaatcgcatcgacatgacgtgcgcgatctgcacagcgacggcggcgat
atcgtttctctggaggtcggtaaggtcagcctgcgtctgatgctcgatcgtgacgatcgc
agcgcttatgcctcgctggcgattgccaacattctggataaacgtcctgacggcggctta
attctggatcctaacttcatgccgtgcagcatcagcgtcacggctattcccaccttaaaa
cgctttttgggggagtccgccggtctggtggcggagcgtgcgcgcagtctggcgcagcgt
attgctgcaccgggacagcagggcgtcgcggatgtcgctgaatttatgatgctgcaatta
cttaaccgcgcgcagcccaaactgtcgcatctggcgcgtctgggcactttgcaccctgaa
cgcctgcacgaaacgctggttgaactgtgcggcgaactgatgacgttcaccgatgaatcg
cgcctgccgccggaattccctgcctaccgccacgagcaccagcaggccagctttgagccg
ctgatgatggcgctgcgtcaggcgctgagcaccgtgctgtcgccgcgcgccgtttccatc
caactgaagaaacagccgtatggcgtgatggtagcaatggtcggtgatgcggaattgatg
accagcgccgagtttgtgctggcggtacgcgcgcgcatgccgcaggagcacctgcgtaaa
cagctgttgcaacaaacgaagatcgcctccagcgagaagatccgtgaactgatcagcctg
caactgccgggaatcccgctactgccgctgccggtggcaccgcgccaactgccttatcac
gcaggttacagctatttccaactggatagacaaagccccgcctggcagatgctggtgtcc
ggcaatacgttggcgttccacattgctggtgaattccctgagctggatatgcagctttgg
gcgatccgcggccagtag

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