KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3252
Entry
PC1_3252          CDS       T00934                                 
Name
(GenBank) type VI secretion protein, VC_A0110 family
  KO
K11896  type VI secretion system protein ImpG
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:pct00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pct02044]
    PC1_3252
Secretion system [BR:pct02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC1_3252
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: ACT14272
UniProt: C6DCU7
LinkDB
Position
complement(3668023..3669789)
AA seq 588 aa
MSLEHFFRDELTYLRLQGREFAKAHPELTRFLSEQTTDPDVERLLEGFAFLTGSLRAKIE
DEFPELTHGLLGMLWPNYLRPVPSMTIMQFSVLPGAIAQPAFVARGCELDSLPIDDVICH
FQTCHDAWIYPADIREIKVQSGNDLSTITLDIGLHGPLSLSDLQLDKLRFYLGGDTYTAY
ELYFWIASQLSHIELEIDGQRFRQEASVLKTVGFEREDALLPYPGNVYSGYRILQEYFCF
PESFLFFQLAGAVWPDLPLTVTEFRLHFCFDRPLPAELKIRPDSFMLNCVPAINLFQHDS
EPINLSGRQTDYPLKASYRNADSFEIFSVDKVEGWVEGNSGRARGIPRTYQPFESFQHQI
ERAKGRLALYYRIRVREAVNGNGFDHMLSFVRGDEQEVIDLDESISVTLTCTNRSRAAQL
PVGAICVPTGNSPSFATFRNLVRPTRPLRPAMDGSLHWTLISNLSLNYVSLLRRDALVQI
LRTYDFPALHDKQAEQASRKRLAGIESIETTPIDRLVQGMPVRGLKSILSVRQSAFSSEG
ELYLFSTVLAHFFSLYASVNAFHLLEVVNIDNKERYRWPVQIGQHSMM
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgtcactggaacattttttcagggatgagctgacctacttgcgcctgcaagggcgtgaa
ttcgccaaggcgcaccctgagcttacccgatttttgtcagaacagaccacggatccagac
gtcgagcgtctgctggaagggttcgcctttttgacagggagcctgcgggcgaagatcgag
gacgaatttccggagctgacacacggtctgctgggcatgctgtggcctaattacctgcgc
ccggtaccgagcatgacgattatgcagttttcggtactccccggcgcaattgcccaaccg
gcgtttgttgcgcgcggctgtgagcttgatagcctgccgattgatgatgtgatctgtcat
tttcagacctgtcacgatgcctggatttatccggcggatatccgcgagatcaaggtacag
agcggcaacgatctttccaccatcacgctggatattgggttgcatggcccgctatcgctc
agcgatttgcaactcgacaagctgcgcttttatctgggtggtgatacctatacggcctac
gaactctatttctggattgccagccagctgtcacatattgagctggaaattgatggtcaa
cgcttccgtcaggaagccagcgtactgaagacggtcggatttgaacgcgaagatgcgcta
ttgccgtaccccggcaacgtttactcgggctatcgcattttgcaggaatacttctgtttt
cctgaaagcttcctctttttccaactcgcgggcgcggtatggccggatctcccgctgacg
gtaacggaattccgtctgcacttttgcttcgatcgcccgctgccagcggaactgaagatt
cgtcctgattcattcatgctcaactgtgtgccggcgatcaatctcttccagcatgatagc
gagccgatcaacctcagcggtcgccagacggattatccgctgaaggccagctatcgtaac
gctgatagctttgaaatcttctctgtggataaggtggaaggctgggttgaagggaattcc
gggcgtgctcgcggcattccacgaacctatcagccttttgagagctttcagcaccaaatc
gagcgcgctaaaggacggctggcgctttattaccgcattcgggtaagagaggcggtgaac
ggcaacggctttgatcacatgctctcttttgtccgtggcgatgagcaggaagtgattgat
ttggatgaatccatttcggttaccctgacctgcaccaatcgctcgcgtgcggcacagtta
cctgtcggggcgatctgcgtgccgaccgggaactcgccgtctttcgcgacatttcgcaat
ctggtgcggccgacgcgaccgctgcggcctgcgatggacggtagcctgcactggacgctg
atctccaacctgtctctgaactatgtgtcgctgctgcggcgcgatgcactggtacagatt
ctgcgtacctatgatttcccggcgctgcacgacaagcaggccgaacaggcttcgcgtaag
cgtctggcgggtatcgaatctatcgaaaccacccctatcgatcgtctggttcaggggatg
ccggttcgcggcttgaaatccattctgtcagtacggcaatccgcgttttccagtgaagga
gaactctatctgttcagtacggtgctggcgcacttcttctcgctatacgccagcgtcaac
gctttccacctgttggaagtggtcaacatcgataacaaggagcgctaccgatggccggta
cagataggtcaacactcaatgatgtga

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