Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3334
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Entry
PC1_3334 CDS
T00934
Name
(GenBank) tRNA/rRNA methyltransferase (SpoU)
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pct03009
]
PC1_3334
03016 Transfer RNA biogenesis [BR:
pct03016
]
PC1_3334
Ribosome biogenesis [BR:
pct03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PC1_3334
Transfer RNA biogenesis [BR:
pct03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PC1_3334
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
DUF6764
Motif
Other DBs
NCBI-ProteinID:
ACT14350
UniProt:
C6DDE3
LinkDB
All DBs
Position
complement(3755180..3756328)
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AA seq
382 aa
AA seq
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MSDSFNSKSGKVRVMYVRSDDEGEKENKNKRPADKDRRGDRRDGGGSRDQREKPKHPRDV
NPRYARENPSRDGDSNKTPWGNKDRNERSGDRPRRPRGEETGGYESPWKTVSRAPGDSET
PDHGGITGKSQIDPEQLRRQRQEETRVYGENACQALFKNRSEVIVRAWFLQEVTPRFRDA
LRWMAANRKAYHVVEEEELIKASGTEHHGGVCFLIKKRQGLDVREYLKTADEHDCVLALE
DVGNPHNLGGIMRSCAHFGVKGILVQDAALLESGAAVRTAEGGAEHVKAINADDFLSVLA
EFRRAGYTIVTTSSHKGTALSQATLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIGGTGKV
ESLNISVATGILLSEWWRQNQA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcattcaatagtaaaagcggcaaagtccgtgtgatgtacgtccgcagtgat
gatgagggcgagaaagagaataaaaacaagcgccctgctgacaaagatcgccgtggcgat
cgacgtgatggcggtggttcacgggatcagcgtgaaaagccgaagcatccgcgcgacgtt
aacccgcgttatgcccgggaaaatccgtcccgcgacggcgatagcaataaaacgccgtgg
ggcaataaagatcgtaacgaacgcagcggcgatcgtcctcgccgcccgcgcggtgaagag
acgggcggttatgaatccccgtggaaaaccgtgtctcgtgcgccgggcgacagtgaaacg
ccggatcacggcggaattacaggcaaaagccagatcgatcctgagcaactgcgtcgccag
cgtcaggaagaaacacgtgtttacggtgaaaatgcctgtcaggcgctgtttaaaaatcgc
tctgaggtgattgttcgtgcctggttcctgcaggaagtgacgccgcgtttccgcgatgca
ctgcgctggatggcggcaaaccgcaaggcttaccacgttgtggaagaggaagagctgatc
aaggcttccggtactgaacaccacggtggcgtctgctttctgattaagaagcgtcaggga
ctggatgtgcgtgagtacctgaaaacggctgacgagcacgactgtgtgctggcgctggaa
gatgtgggtaacccgcacaacctcggcggcattatgcgcagctgcgcgcatttcggcgtg
aaaggtattctggtgcaggatgcggcgctgctggaatctggcgcggccgtgcgtacggcg
gaaggcggtgcggaacacgttaaagcgattaacgctgacgatttcctgtctgtgctggcg
gaattccgccgtgctggctacaccatcgtgaccacgtccagccataaaggtactgcctta
tcgcaagctacgcttccggcgaaaaccgtgattgtgttgggtcaggaaggggatggcctg
tcagatagcgcctggcaacagggtgatgtaaaagtctctatcggcggtactggtaaggtt
gaaagtctgaatatttcggtcgcaacgggcattttgctgtccgagtggtggcgacagaac
caggcctga
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