Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3415
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Entry
PC1_3415 CDS
T00934
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_3415
Transporters [BR:
pct02000
]
Other transporters
Pores ion channels [TC:
1
]
PC1_3415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ACT14431
UniProt:
C6DDM4
LinkDB
All DBs
Position
complement(3859438..3863460)
Genome browser
AA seq
1340 aa
AA seq
DB search
MMDEKKAQDAAAEESVAQDNVQTTPARKGRWWKRIGIGIAAFLLLLVIGVGLLVGTTPGL
HLLLNTAARVVPGLDIASVSGGWRDLTLKNVSYEMPGVTVKSDEFHLSLALGCLRKSQLC
INDLSANRVDVVVDTKALPVTEEPPPPSTPVTEISAPFPISLRQLVLNSVQVTVDDTAIS
LGEFRTGMQWEGRALTLLPTKISALLVTLPKTPVDVLEDGKVTAAEMASVIKETAANVRE
AAEQGSSQTLQIDKVLEANNTVAAATTTTPTASTPKTDGAADKPAVPEQPLGERLSELFS
KPLLPDLPQFTLPLDLNIVEIHGEQLRLTGDQDIVINNLFVQASTQQQHLRLDKLIVQSP
QGGLNVRGEATLSDNWPVSLTANGVLNVDPLKGETLKLAVDGGLREQLNVALNLSGPQRA
QLDLQTKLAETGLPLALTLQTERVRWPLTGTTQYQASNVRLRFNGKVTDYALSLRGDLSG
ADIPPATLLLDGKGNEQQFTLSRLRLAALQGNADLSALIDWSKAISWRSELLLNGINTAK
QWPEWPAKIDGKITTRGSVYGGSWQLQVPELRLDGNVKANKLTARGELRGNAAGQWTIPG
LNLALGRNQLNVKGDLSDKWQLDADINAPSLDGMLPGLAGRAIGTLKLRGNLREPQMLAD
ITASGLRWQAITISQVRVEGDVRSEQQIQGKLAVRLEALKQDGLNIALLTLDASGNEKQH
QLRLNMQGEPVAGQLALSGSFDRQEQRWRGTLNNTRFDTPVGEWRLTQDMALDYLNTQQK
ITIGTHCWRNPNAELCVPKAIEAGPSGQASIRLNRFDLAMLKPFLTADTVLAGTFTGGAD
ISWQAGQGLPQAKVSLVGNGVSVRQQMQGNTLPIDFDTFTLNAGLDRGRAQLGWLMAIRE
NGRFSGDIQVTDPQGRRNLGGNVTINNISLALLNPALSKGEKAAGILNANLRLAGDAARP
QIFGQMVLERLDIDGNWMPVDLTNGRLAVNFSGMSSTLQGFLKTDNGQLNLGGNADWSRP
DAWRARIAAKGQKLRVTIPPMARLDVSPDIVFEATPQLFALNGSVSIPWARIVVKDMPES
AVAVSSDEVMLDAQRQPLKKASAAIPINSNLTIRVGNDVRLDAFGLAARLQGDLKMVQDE
RGLGLNGQIDIPSGRFKAYGQDLIVRKGLILFSGPPDQPILNIEAVRNPDNTADDVTAGV
RVTGMAATPKLEVFSDPAMSQQEALSYLLRGQGLDSGGADSSAMTSMLVGLGVAQSGQVV
GKIGEAFGVSNLALDTQGVGDNSQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKL
YLEAVSGISQALDVLYQFEF
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaaaaaaaagcacaggatgccgcggcagaagaaagcgttgcgcaggataac
gtgcaaacgacgccagcgcgaaaagggcgctggtggaaacgtatcggcattggtatcgcc
gcattcttgttgctgcttgttattggcgtagggctgctggtgggcactacgccgggtctg
cacctgttgctgaataccgcagcacgcgtggtgccggggctggacattgccagcgtgagc
ggcggctggcgtgatttaacgctgaaaaatgtcagctacgagatgccgggcgtgacggta
aagagtgatgaatttcacctgtcgctcgcgctggggtgtctgcgcaaaagccagctgtgc
attaacgatctctcggcgaaccgcgtcgatgtggttgtggataccaaagccctgcctgtg
acggaagagccaccgccgccttcgactccagtcactgaaatctccgcacctttccctatc
tctctacgtcaactcgtgctcaatagcgtccaggttaccgtggatgacacggcgatttct
ctgggcgaattccgcaccggaatgcagtgggaagggcgcgcattgacgctgctgccgacc
aaaatcagcgcactgctggtgactttaccgaaaacccctgtcgatgtgctggaagatggc
aaagtgacggcggcggaaatggcgtccgtcatcaaagaaacggcggcgaacgtacgtgag
gcggctgaacaaggctcttcgcaaacgcttcaaatcgataaagtgctagaggcgaataat
acggtagcggccgccacgacgacgacaccgacagcgtcgacgccaaaaacggatggcgcc
gctgacaagccggcagtccctgaacagccgctgggcgaacgcctgagcgagctattctcc
aaaccgctattaccggatttaccgcagttcacgctgccgttggatctgaatattgttgag
atccacggtgaacagctgcggctgacgggcgatcaggacattgtgattaataacctgttc
gtgcaggcgtcgacccagcaacagcatttgcgactggacaaactgatcgtgcaatcgccg
cagggtgggttgaatgtacgcggtgaagcgacgcttagcgataactggcccgtctcgctg
acggcgaacggcgtgctgaatgtcgatccgctcaaaggcgaaacgttgaaactggcggtc
gatggcggcctgcgtgaacagctgaatgtggcactgaatctttctgggccgcagcgcgcc
cagttggatttgcagaccaaactggcggaaaccgggctgccgctggcgttgacgttgcaa
accgagcgtgtgcgctggccgctgacgggtacaacgcagtatcaggccagtaacgtcagg
ctgcgttttaatggcaaagtgaccgactacgcgttatcgctgcgcggcgatctgagcggt
gcggatattcctcccgcgacgctgctgctggatggcaaaggcaacgagcagcagtttacg
ctgagccgcttgcggctggcggcgttgcaggggaatgccgatctgagtgcgcttatcgac
tggagcaaagcgataagctggcgcagtgagctgctgctgaacgggattaacaccgcgaaa
cagtggcctgaatggcctgcgaaaatagacggcaagataacaacgcgcggtagcgtctat
ggcggtagctggcagttgcaggtgccggaactgcggctggatggcaacgtgaaagcgaat
aagctcacggccagaggtgaactgcgtggcaatgcggcaggccagtggacaataccaggg
ctgaatctggcattaggccgcaaccagttgaatgtcaaaggtgacctgagcgacaaatgg
cagttggatgcagacatcaatgcgccatcgctggacggtatgttgccgggtctggcagga
cgcgccatcgggacactcaagctacgcggcaatctgcgtgaaccgcagatgctggcggat
atcaccgcttccggcctgcgctggcaggcaataacgataagtcaggtgagagtagaaggc
gatgtgcgctccgaacagcagattcagggtaagctggccgtgcgcctcgaagcgctgaag
caggatggtctgaatattgcgctgttgacgctggatgccagcggcaatgaaaagcagcac
cagcttcggctgaatatgcagggtgaacccgtcgcggggcaactggcactttcaggcagc
ttcgatcgtcaggaacagcgctggcgcggtacgctgaacaatacccgcttcgacacccct
gtcggtgaatggcgtctgacgcaggatatggcgctggactacctgaatacgcagcagaag
atcaccatcgggacacactgctggcgtaacccgaacgcagaactgtgcgtaccgaaagcg
attgaggccggaccgagcggacaggcaagtatccgattgaaccgtttcgatctcgctatg
ttaaagccgttcctgacggcagataccgtgctggcggggacgtttaccggtggtgcggat
atcagttggcaggcggggcaaggcttaccacaggcgaaagtgtcgttggtgggcaacggt
gtgagcgttcgtcagcagatgcagggcaacacgctgccgattgatttcgatacctttacg
ctgaatgccgggctcgatcgcgggcgggcgcagcttggctggctgatggcgatccgggag
aacgggcgtttcagcggtgatattcaggtgaccgatccacaagggcggcgcaatctcggc
ggtaatgtcacaattaacaatatttcgctggcgttgctcaaccctgcgttgagtaaagga
gagaaagcggcagggatactgaatgcgaacctgcgcttggcaggggatgcggcacgtcct
cagatctttggccagatggtgctggagcgattggatattgatggcaactggatgccggtt
gatctgaccaacgggcggctggcggtaaatttcagcgggatgtcatcaacgctgcaaggc
ttcctgaaaacggataacggacagttgaacctcggtgggaatgccgactggtcgcggcct
gatgcgtggcgtgcgcggattgcggcgaaaggccagaagctgagggtgacgattccaccg
atggcgcggctggatgtctcgccggatattgtcttcgaggctacgccgcagctgtttgcg
ttaaacggttcggtcagtattccgtgggcgcgcattgtggttaaagatatgccggaaagc
gcggtggcggtgtcatcggatgaagtgatgctggatgcccagcgccagccgctgaagaaa
gccagtgcggcgattccgattaatagcaatctgacaatccgcgtcggaaatgatgtgcgg
ctggatgcgttcggcctggctgcccgcttgcagggcgacctgaaaatggttcaggacgaa
cgcggactggggctgaacgggcaaatcgatattccgtccggccgttttaaagcctacggg
caggatctgatcgtccgcaaagggctgattctgttctctggcccgcctgatcagccgatc
ctgaatatcgaagccgttcgtaacccagacaacaccgctgatgacgtcaccgccggggtg
cgtgtcaccggcatggccgccacgccgaagctggaagtcttctccgatccggcaatgtcg
cagcaggaagcactctcttatctgctgcgtggacagggtttggacagcggtggagccgat
agctcggcaatgacctcaatgttagtcggtttaggggttgcacaaagtggtcaagttgtg
ggtaaaatcggcgaggcctttggcgtaagtaatttagctctggatacacagggtgttggc
gataattctcaggttgtcgtcagcggctacgtccttccgggtctgcaagtgaaatatggt
gttggcatattcgattctttggcaacgttaacgctgcgttaccgcttgatgccaaagcta
tacttggaagcggtgtctggaattagccaggcattagatgtgctctatcagtttgagttt
tag
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