Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3606
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Entry
PC1_3606 CDS
T00934
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00061
Fatty acid biosynthesis
pct00071
Fatty acid degradation
pct01100
Metabolic pathways
pct01212
Fatty acid metabolism
pct02024
Quorum sensing
pct04146
Peroxisome
Module
pct_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PC1_3606
00071 Fatty acid degradation
PC1_3606
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PC1_3606
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_3606
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pct01004
]
PC1_3606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pct04147
]
PC1_3606
Enzymes [BR:
pct01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PC1_3606
Lipid biosynthesis proteins [BR:
pct01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PC1_3606
Exosome [BR:
pct04147
]
Exosomal proteins
Exosomal proteins of breast milk
PC1_3606
Exosomal proteins of breast cancer cells
PC1_3606
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACT14621
UniProt:
C6DEV7
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All DBs
Position
complement(4066003..4067808)
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AA seq
601 aa
AA seq
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MTNHLQPYHVVHRVQDRINHCAGRIALREWTPAGEQQLTWTQAGQRIRRIASALLALRVD
VQERVAIFSHNSMNWSLADLALLHLRAISVPIYATNTAAQAAFIINDADIRTIFVGGQEQ
LDALLSLRESCPQLRNIIVMDEGVNLRGSDIVQSLHEFEAQAVDEFWRDEWQTRIDSRDL
NDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKLHDDRLDMSENDVSLCFLPLSHVFERAWS
FVIMHRGAQNVYLRDTNLVRAAMQAVKPTVMCAVPRFYEKVYSAIHEKVAQAPWYRQRLF
NWAVTQGQYVFLASQTAKKAGLFRRIMHRYADRLVLGKLRQLLGGEIRFMPAAGARLDDN
IIMFFSSIGIRIIYGYGMTETCATVSCWEENRFRLGSIGTPLPGIEVRIGEEKEIQVRGA
TIMRGYFHRPQETAEAFTEDGWLKTGDAGELDANGNLFITERLKDLMKTSGGKYIAPQHL
EGTLGQDRFIEQVAIIADTRKYVSALIVPCFEALEEYAHSINLKYHDRLELLRHSHIIEL
FEQRLREMQKELSRVEQVKKFTLLPVPFSMAEGELTPTLKLRRKIINQRYQLEIDAMYAE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcatttacagccatatcatgtggtgcaccgggttcaagatcggatcaatcac
tgcgcgggtcgtattgcgctgcgcgagtggacgcctgcgggcgaacaacagctcacctgg
acacaggccggacagcgcattcggcggattgcaagcgcgctcctggcgctgagagtcgac
gttcaggaacgtgtagcgattttctctcataactcgatgaattggtcgctggccgatctg
gcgttgctgcacctgcgtgcgatcagtgtgccaatctatgccaccaatacggcggcacag
gccgcgttcatcatcaatgatgccgatatccgtacgatatttgttggtggtcaggagcag
ttggatgcgttgctgtcgttacgtgagagctgcccgcaactgcgaaatattatcgtgatg
gatgagggcgttaacctgcgcggtagcgacatcgttcagtccttacatgagtttgaagcg
caggcggtagacgagttctggcgtgatgaatggcaaacgcgtatcgacagccgcgatctc
aacgatctgtttacgctgatttatacctctggcaccactggcgagccgaaaggtgtcatg
ctggattataccaacatggcgatgcagcttaagctgcacgacgatcgtctggatatgtca
gaaaatgacgtatcgctctgtttcttaccgctttcacacgtatttgagcgcgcatggagt
tttgtcattatgcatcgcggcgcacagaacgtgtacctccgtgatacgaatctggtacgt
gccgcgatgcaggcggtgaagcctacggtgatgtgcgcggtaccgcgtttttatgagaaa
gtgtatagcgcaatccatgaaaaagtggcgcaggcaccgtggtatcgccagcggctcttc
aactgggctgttacgcaggggcaatacgtttttctggctagccagacggcgaaaaaagcg
ggactcttccgccgcattatgcatcgctatgctgaccgtctggtgctagggaaactgcgc
cagcttctgggaggcgagattcgttttatgccagccgcaggcgcgcgactggatgacaat
atcattatgtttttcagctcgatagggattcgcatcatctatggttacggtatgaccgaa
acctgtgcgacggtttcctgttgggaagaaaatcgtttccgcttaggttctattggcacg
ccgctgccgggtattgaagtccgtattggtgaggaaaaagagattcaggtgcgtggagcg
accatcatgcgcggctatttccatcgtccgcaggaaaccgcagaagcctttaccgaagac
ggctggctgaaaactggcgacgcgggggaactggatgccaacggtaacctgtttattacc
gagcgcttgaaagatctgatgaaaacctcgggggggaaatatatcgccccgcagcatctg
gaagggacgctgggacaggatcgcttcatcgagcaggttgcgattatcgcagacacgcgt
aagtacgtctctgcgctgattgttccctgtttcgaggcgctggaggaatacgcgcactct
atcaatctgaaataccacgatcgtctggagttgctgcgccacagccatattattgagctg
ttcgagcagcgcctgcgggagatgcagaaggaactttcccgtgttgagcaggtaaagaaa
ttcacgctgctgcctgtgccgttttcgatggcggaaggggagttgacgccaacgctcaag
ctgcgcagaaagatcatcaaccagcgttaccagttggaaattgatgcgatgtacgccgaa
tcctga
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