Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3616
Help
Entry
PC1_3616 CDS
T00934
Name
(GenBank) extracellular solute-binding protein family 5
KO
K11925
SgrR family transcriptional regulator
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_3616
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
Other families
PC1_3616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_NPRL3
HTH_Mga
Sigma70_r4
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ACT14631
UniProt:
C6DEW7
LinkDB
All DBs
Position
4077806..4079464
Genome browser
AA seq
552 aa
AA seq
DB search
MSSPRLQQQFIRLWQHFQGQTTDTTLQELTGVLNCSRRHIRSLLNAMQQEGWLVWQAEAG
RGKRSQLSFVYTGLALQQQRAEDLLEQDRIEQLVQLVGDKEAIRQMLLAHLGRSFRQGKH
ILRILYYRPLRNLQPGSALRRSEMHIARQIFSGLTNINEENGEVEPDLAHHWQRVSSLHW
RFYLRPAIRFHHGRELTMDDITTSLSRLIPLPLFSHIESVTSPMPFVIDIRLNSPDNWLP
WLLGSVHAMILPQEWQTLPDFAQHPIGTGPYAVVRNNSNQLKIRAFDDYFGYRALIDEVN
IWVLPDEPEEMPVSIQLQSDNSRHEQLESRMEEGGYFLLFDKRSPLASRPEAQRWLRQIF
NPISLLNHANTSNQRDWSPAYSLLPRWHHHHPDVPQSIPKGLTDVTLTFYQAHPEYRILS
EIMRTLLAQHGVTLHIQTVSYEDWYQGNADSDIWFGSLNCYLPIEFSLFAMLYELPLAQH
CLDDNLHADAQQWRNQTLPMAEWCEKLIASGQLHPLLHHWLQLQGQRSMRGVRMNMLGWF
DFKSAWFAPPER
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccctcgattgcaacaacagttcatccgcctgtggcaacactttcagggacaa
accaccgacaccacgctgcaagagctaaccggggtgttgaactgttcccgacgtcatatc
cgctcattgttgaacgcgatgcagcaagaaggctggctcgtctggcaggcagaagctggc
agggggaagcgctctcaactgtcatttgtttataccggattagcactacagcagcagcgc
gcagaggatctgctggaacaggatcgcattgagcaactggtgcaattggtcggtgataaa
gaagcgatacgccagatgttacttgctcacctcgggcggagcttccggcagggaaagcat
attctgcgtattctctattaccgcccattacgcaatttgcagccgggatcggcgctgcgg
cgttctgaaatgcacatcgcacggcaaattttcagcggtcttaccaatataaatgaggaa
aatggggaagttgaacccgatctggctcatcactggcagagggtctcctccctgcactgg
cgcttctatctgcgcccggctatccgttttcatcacggacgagagctcacgatggatgac
atcaccacgtcactctctcgtcttattccgctcccgctcttttctcatattgaaagcgtc
acctcgccaatgcccttcgtgattgatattcggttaaacagcccggataactggctaccg
tggttattaggcagcgtgcacgccatgattttgccgcaagagtggcaaaccctacccgat
tttgcccagcacccaattggtaccggcccttatgccgtggtacgcaataacagtaatcaa
ttgaaaattcgcgccttcgatgactattttggctatcgggcgctgattgatgaggtcaat
atctgggttctgcccgacgagccggaggaaatgccagtatctatccaactccagtctgac
aattctcgtcacgaacagttagaaagccggatggaagaaggcggctatttcctgctgttc
gacaagcgttcgccgttagcatcacggccggaagctcagcgatggctcaggcagatattt
aaccccatttcgctactcaaccacgccaataccagcaaccagcgtgactggtcgcccgcc
tacagcctgctgccacgctggcaccatcaccatcccgatgtaccgcaatccattcctaaa
gggctgacggacgtcacactcacgttctatcaggcacatcctgaataccggatattaagt
gagattatgcgcacgctgctggcacagcacggcgtcacgttgcatattcagacggtcagc
tatgaagactggtatcagggcaatgccgacagcgatatctggtttggtagcctgaattgt
tacctgccgatcgaattttccctgttcgcgatgctctacgaactcccgctggcccagcac
tgtctggatgacaatctgcatgcagatgcacagcagtggcgtaaccagacgctgccgatg
gcggagtggtgtgaaaaactgatcgccagcggtcaactgcaccctctgctgcaccattgg
ctgcaacttcaggggcagcgcagtatgcgcggcgtccggatgaatatgctgggctggttt
gattttaaatctgcctggttcgcgccgccggaacgctga
DBGET
integrated database retrieval system
