Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3629
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Entry
PC1_3629 CDS
T00934
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pct03021
]
PC1_3629
Transcription machinery [BR:
pct03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PC1_3629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACT14644
UniProt:
C6DEY0
LinkDB
All DBs
Position
4094851..4097754
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETSAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIIVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRNAQRFAQLVNADWDLLVVDEAHHLVWSEESPSAEYQAVET
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFLAEQQQYRPVADAVTLLLA
GEKAQTAELNALSDLLGEQDIEPLLKAINSDSDDNQKARQELIAMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPSQYQTAIKVSGIMNANKTLEVRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTANRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQILVPYLENTAQAMLVRWYHEGLDAFEHTCPTGRTIYDAHHAQLIERLTTVGEQQ
GLDEFIHTCRQQHDNLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQADVHAMLQQAEALVEAQARQ
LITEAQEQADLQLRRELERLEALKAVNPNIREDELTALESQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggactggga
acggttgttgccgtcgatacgcgaatgataacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgacgcccccatcacccgcgtgatgttcaaccccggcgatacc
gtcaccagccatgaaggctggcagctcaaagttgatgacgtgcgagaagaaaaagggttg
ctggtgtattgcggccaacgtctggacgatgaaacatcggcggaactgcgtgaagtcttt
ttggacagcaaactgacgttcaataaaccacaagaccgcctgttcgccggacagatcgat
cgtatggatcgctttgccctgcgctatcgcgcccgcaagcatcagaacgagcaggcgctg
caacaatggggcggtttgcgcggcatgcgtgccagcctcatccctcatcagcttcatatc
gctcatgaagtcggccaacgtcatgcgccacgtgtgttgctggcggacgaagtcggtctg
gggaaaaccattgaagccggtatgatcatccaccagcagttgctggcgggtcgtgccagc
cgcgtgctgattatcgtaccggaaaccctgcaacatcagtggctggtcgaaatgctgcgc
cgctttaacctgctgttctcgctgtttgacgacgagcgctatgccgaagccaagctggat
agtagcaatccgttcgaaaccgaacagttggtgatttgttcactgggatttgtgcagcgt
aacgcccagcgttttgcacagctcgtcaacgccgattgggatctgctggtggtggatgaa
gctcaccatctggtctggagcgaagagagtcccagcgcagaatatcaggccgttgaaacg
ctggcacgcgccacgccagctgttctgctgttaaccgcaacgccggaacagcttggtcag
cagagtcactttgcacgtttacgcctgctcgatcccaaccgtttccacgactatcaggaa
ttccttgccgagcagcagcagtatcgcccggtcgccgatgccgtcacgttgctgttagcg
ggcgagaaagcccagacggctgaactgaatgcgctgagcgatctcttgggcgagcaggac
atcgagccgctgctgaaagccatcaatagcgacagcgatgacaatcagaaggcgcgtcag
gaactgatcgccatgctgatggatcgccacggcaccagccgcgtgttgttccgtaacacg
cgtcagggggttaaaggtttcccgcagcgtatcctgcatcaaatccgcctgccgctgccg
tcacagtaccaaacggccattaaagtatccggcattatgaacgcgaataagacgctggaa
gtccgcgcccgcgacatgctgtacccggaacaaatttatcaacagctcgaaggggacgat
gccacctggtggaacttcgacccgcgcgtggaatggttactgaactacctgaccgccaac
cgagatgaaaaagtgctggtgatctgtgcgcaggccgccacggcactacagctggagcaa
gtgctgcgcacgcgtgaagcgatccgcgccgccgtcttccatgaaggactgtcgattctg
gagcgtgaccgcgccgccgcctactttgcttccgaagaagaaggcgcacaggtgctgatc
tgttcagagatcggctccgaaggccgcaacttccagtttgccagccacttagtgatgttc
gatctgccgttcaaccccgatctgctggaacagcgtatcggccgtctggatcgtatcggg
caggcaaaagaaattcagattctggtgccgtatctggaaaataccgcgcaggccatgctg
gtgcgctggtatcacgaagggttggatgcgtttgagcacacctgcccgacaggccgcacc
atctatgatgcgcaccacgcgcagctgatcgagcgactgacgaccgtcggtgaacagcaa
ggactggatgaatttattcacacctgccgccaacagcacgacaacctgaaacagcaactt
gaacaaggccgcgatcgtctgctggaaatgcattctaacggtggagaacaggctcagttg
ctggcgcaggccatcgccgagcaggataatgacgtcaatctggtgacattcgcgctgaac
ctgtttgatattgttggcatcaatcaggaagatcgcagcgataacctgatcatcctgacg
ccatccgatcatatgctggtgccggatttccctggtctgccgcaggacggttgtacgatc
actttcgatcgcgatcaggcactttcccgcgaagatgcgcagtttatcagttgggaacac
ccgctcatccgtaacggactcgatctggtgctgtccggtgataccggaagctgtgcagtg
tcgctgctgaaaaataaagccctgccggtcggtacgctgctggctgaactggtttacgtt
gtagaagcacaggcgcctaaacacctgcagttgacccgcttcctgccgccaacgccagtt
cgcctgctcatggatcgtaaagggactaatctggcggcacaggttgagtttgagagcttc
aatcgccagctgaacgcggtaaaccggcatacgtccagcaagctggtgaatgcggtacaa
gcagacgtccacgccatgctacagcaggcggaagcattagttgaagcgcaggcacgccag
ctcattaccgaagcacaggagcaggctgacctgcaattgcgccgcgagctggaacgtctg
gaagcgctgaaagccgtcaaccctaacattcgtgaagatgagctgaccgcgctggaaagc
cagcgtgagcaggtgctgagtaacctgcacgaagccaactggcgtctggatgcgatccgt
ctggtcgtggtaacgcatcagtaa
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