Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3656
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Entry
PC1_3656 CDS
T00934
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_3656
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PC1_3656
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
RhopH3_C
Motif
Other DBs
NCBI-ProteinID:
ACT14671
UniProt:
C6DF07
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All DBs
Position
complement(4125018..4125971)
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AA seq
317 aa
AA seq
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MLCQKRQEGAGVSHLNFNHLYYFWQVYKSGSVAGAAETLFLTPQTITGQIKCLEERLQGK
LFKRKGRGLEPTELGQLVFRYADSMFQLSQEMLDIVNYRKESNLLFDVGVADALSKRLVS
RVLETVVTEQEHIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSTQQEGLFSIKLGECG
VSFYCKRPQPEYAFPACLEERKLLIPGRRTMLGRKLLNWFTAQNIQVNILGEFDDAALMT
AFGINNDAIFVAPSLYANEIYQQGDIVEIGRIENIQDEYYAIFAARMIQHPAVQRVCNAD
FSALFCDRAEGLSRADG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctatgccagaagcgccaagagggggcaggtgtgtctcatttgaattttaatcatctc
tattatttctggcaggtttataagtcgggctccgttgccggggcagccgagacgctgttc
ttaacgccgcagaccattaccgggcaaatcaaatgcctggaagagcgtctgcagggcaaa
ctcttcaagcgtaaagggcgggggctggaaccgacggagctggggcaactggtttttcgc
tatgcggatagcatgttccagctcagccaggaaatgttggatattgtgaactaccgcaaa
gaatcgaacctgctattcgatgtcggtgtggcagatgcgttgtccaaacggctggttagc
agggtactggaaacagtcgtgacggagcaggaacatatccatttgcgctgttttgagtcg
acgcatgagatgctgctggagcaactgagtcagcataagctcgatatgattctgtcggat
tgcccggtggattcaacgcagcaggaggggctgttttcaatcaagctgggcgagtgtggc
gtgagtttttactgtaaacgtcctcagcctgagtatgcttttccggcttgccttgaagaa
cgtaaattgttgattccagggcgacgaaccatgttgggacggaaactgctgaactggttt
actgcgcagaatattcaggtgaacattttgggcgaatttgatgatgcagcgctgatgact
gccttcggcattaataatgatgcgattttcgttgcgccatcgctgtatgccaatgagatt
taccagcagggggatatcgtcgagatcggcaggatcgagaacattcaggacgagtattat
gcgatctttgcggccagaatgatccagcatccggcggtacagcgtgtctgtaacgcagat
ttttcagcgctcttctgtgatagagcagaaggcctgtcgcgggctgatggataa
DBGET
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