Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3912
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Entry
PC1_3912 CDS
T00934
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PC1_3912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ACT14927
UniProt:
C6DGG4
LinkDB
All DBs
Position
4404519..4406852
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AA seq
777 aa
AA seq
DB search
MNDSLSHIIASELQARTEQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLG
YLRELEDRRQTILKSIDEQGKLTPQLATAINGTLSKTELEDLYLPYKPKRRTRGQIAIEA
GLEPLADGLWQDPSQDPELTAQAYVDAEKGVADVKAALDGARYILMERFAEDATLLAKVR
NYLWKNAHLVSRVVEGKEEEGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALNA
DPQHEEAPRESYCEQIIIDHLNLRLGNAAADSWRRAVISWTWRIKVLLHLETELMGSVRE
KAEDEAINVFARNMHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT
GQAAKAATSVATLCRKYQVELVAIGNGTASRETERFFLDTQKQFPDINAQKVIVSEAGAS
VYSASELAALEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSLLAK
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLTRMMAQNIVTWRDENGRFHNREQLLKVSR
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATEQALQALMGNPNTLRNLK
PADFTDERFGVPTVTDIIKELEKPGRDPRPEFKTASFAEGVETLNDLLPGMILEGAVTNV
TNFGAFVDIGVHQDGLVHISSLADHFVDDPHKVVKAGDIVKVKVMEVDLQRKRIALTMRL
DEQPGETSSRRGGGTARGDNNTSPRQSTGKSRPRPANTPATGNSAMGDALAAAFKKR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcattaagccacatcatcgccagcgaattgcaggcgcgtacggagcaggtg
gacgccgcagtccgtctgctggatgaaggaaataccgtcccttttatcgcccgttaccgt
aaagaagtgaccggcgggttggatgacacccagttgcgccaactcgaaacgcgcctcggc
tacctgcgtgaactggaagatcgacgccagactattctgaaatccatcgacgagcaggga
aaattaaccccacagctcgcgactgccattaacggcacgctgagcaaaaccgagctggaa
gatctctatctgccgtataaacctaagcgccgcacacgtggacaaatcgcgattgaagcc
ggtctggaaccgctggccgacggcctgtggcaagacccgagccaggatccagagctgacg
gcacaggcttatgtcgatgccgagaaaggcgtggcggatgtgaaagctgcgctggatggc
gcacgttacatcctgatggagcgctttgccgaagacgcgacgctgctggcaaaagtacgt
aactacctgtggaaaaacgcgcatctggtttcccgcgtcgtggaagggaaagaagaagaa
ggcgcgaagttccgcgactatttcgatcatcacgaaccgattgctcaggtgccttcacac
cgcgcactggccatgttccgtggacgcaatgaaggcgtgctgcaactggcgctgaacgcc
gatccgcaacatgaagaagcgccgcgtgagagctactgcgaacaaattattatcgaccac
ctgaacctgcgtttgggtaatgcggcagcggacagctggcggcgcgccgtgattagctgg
acgtggcgcattaaagtcctgctgcaccttgaaaccgaactgatgggcagcgtgcgcgaa
aaagccgaagacgaagcgatcaacgtctttgcccgcaacatgcacgacctgctgatggcc
gcgccggcgggcatgcgcgccacgatgggtctcgatcctggcctgcgtactggcgtaaaa
gttgcggtggtggatgccactggcaagctggtcgcgaccgacacgatttatccacatacc
ggtcaggcagctaaagcggcgacgtcagtggccacgctgtgccgcaaatatcaggttgag
ctggtggcgattggcaacggaaccgcctcacgtgaaaccgagcgtttcttcctcgatacg
cagaaacagttcccggatatcaatgcgcagaaagtaatcgtcagcgaagctggcgcgtcg
gtgtactccgcgtccgagctggctgcgctggaattccccgatctggatgtgtcactacgc
ggcgcggtgtccatcgcccgtcgcttgcaggatcctctggcggagctggtgaagatcgat
ccgaaatccatcggcgttggtcagtatcagcatgacgtgagccaaagcctgctggcgaag
aaactggatgcagtggtcgaagactgcgtaaacgccgtcggcgttgatctgaacaccgcc
tccgtcgcgctgctgacacgtgttgcagggctgacgcgtatgatggcgcaaaatattgtg
acctggcgtgatgagaacggccgcttccacaaccgtgaacagttgctgaaagtcagccgt
ctggggccaaaagcctttgagcaatgcgcgggcttcctgcgtattaaccacggcgataac
ccgctggatgcttctaccgttcacccggaagcctatccggtcgtagaacgcattctggcc
gcgaccgaacaggcattgcaggcgctgatggggaatccaaacacactgcgtaacctgaaa
ccggctgatttcaccgatgagcgtttcggcgtaccgacggtgaccgacatcatcaaagag
ctggagaaaccaggccgcgatccgcgccctgagttcaaaaccgccagcttcgccgagggt
gtggaaaccttaaacgatctgctgccgggtatgattctggaaggtgcggtcaccaacgtc
accaactttggcgcgtttgtggatatcggcgttcatcaggacgggttggtacacatttca
tcactggccgatcatttcgttgatgacccgcacaaggtcgtgaaagcgggcgacatcgtg
aaagtgaaagtgatggaagtggatctgcaacgcaagcgcatcgcgctgaccatgcgcctt
gatgagcaaccgggtgagacatcatcacgccgtggcggtggcacagctcgcggtgataac
aacacctcaccgcgtcaatcgacaggcaaatcacgtcctcgtccagcgaatacaccagct
acaggtaatagcgcgatgggtgatgcgttagccgccgcctttaaaaaacgttaa
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