Pectobacterium carotovorum subsp. carotovorum PC1: PC1_3944
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Entry
PC1_3944 CDS
T00934
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_3944
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PC1_3944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
HTH_26
HTH_24
HTH_23
HTH_IclR
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ACT14959
UniProt:
C6DH86
LinkDB
All DBs
Position
complement(4448776..4449774)
Genome browser
AA seq
332 aa
AA seq
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MMKKKRPVLQDVADRVGITKMTVSRYLRNPAQVSAALQEKIAIALDELGYIPNLAPNMLA
SSTSRAIGVLLPSLTNQVFAEVLRGIERTAEAHGYQTMLAHYGYHPDREEQRLTSLLSYH
IDGLILAERTHTPRTRQMLDVAGIPVVELMDSVSPCLDMAVGFDNVEAGRQMTLRMVALG
HRHIVYLGARQDERTIMRCRGYEQAMWESDLKSYCVMSEQASSYSLGGELLRQTQAEYPQ
VDSVFCTNDDLAVGAMFECQRQGLRVPEDIGVAGFHGHDIGQAMVPKLASVLTPREHMGR
VGTERLLARLRGEPVAQGMVDVGFTVLDGESL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaagaaaagacccgttctccaggacgttgctgaccgcgttgggattaccaaa
atgacggtaagccgctatttgcgtaaccctgcgcaggtgtcagccgcgttgcaggaaaag
atcgctattgcattggatgagctgggctatattcccaatctcgcgccgaatatgcttgcc
agctccaccagtcgggcgattggggtgctgctgccgtcattaaccaatcaggtttttgcc
gaggtattacgtgggattgagcgcacggcggaagcgcacggttaccagaccatgttggcg
cactatggctatcatcctgacagagaagaacagcgcctgacctcactgctgtcgtatcac
atcgatgggcttattctggccgaacgtacccacacgccacgaacgcgccagatgctggac
gtcgccggcattcctgtggtggaactgatggattccgtctcaccctgtctggatatggcc
gttgggtttgataacgtcgaagccgggcgtcagatgacgctgcgtatggtcgcgctgggg
catcgtcatatcgtctatctcggggcgcggcaggatgagcgtacgattatgcgctgtcga
ggctacgagcaggcaatgtgggaaagcgatctcaaaagttactgcgtgatgagcgagcag
gcgtcttcctattcgctcggtggtgagctgctgcggcagacacaggcggaatacccgcag
gtcgatagcgtattttgtaccaacgacgacttagccgtcggcgcgatgtttgaatgccag
cgccagggattgcgcgtgccggaagatatcggtgtagcgggtttccacgggcacgatatt
ggtcaggcgatggtgcctaagctggcgagcgtactgacgccgcgtgagcacatggggcgt
gtcggcaccgagcgtttactggctcgtctgcggggcgagccagttgctcagggcatggtc
gatgtcggttttaccgtgctggacggtgaaagcctttaa
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