Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4177
Help
Entry
PC1_4177 CDS
T00934
Name
(GenBank) ABC transporter related
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_4177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_4177
Transporters [BR:
pct02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PC1_4177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_29
AAA_16
AAA_25
nSTAND3
AAA
AAA_33
NACHT
MobB
AAA_24
PRK
SRP54
TsaE
Zeta_toxin
AAA_30
SbcC_Walker_B
AAA_19
AAA_17
TrwB_AAD_bind
DUF87
APS_kinase
NB-ARC
nSTAND1
ATP-synt_ab
NTPase_1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACT15191
UniProt:
C6DJ92
LinkDB
All DBs
Position
4715448..4717133
Genome browser
AA seq
561 aa
AA seq
DB search
MSLSASLQTSAAVPVLALENVTIAYRSDDREQTVVEGVSFHIQPGEVVALVGESGSGKTT
TAQAVIGLLAENGRLTRGAIRLNGVDISDWSQKRLDSVRGAQISLIPQDPTSSLNPVQTI
GEQVDEILRIHQREDRQTIRQKTLALLERVGLNQPELRAKQYPHELSGGMKQRVLIAIAI
ALKPALIIADEPTSALDVTVQKRILDLLDELRRENGTAVLFVTHDLGVAAERADRLLVFQ
NGYIQEQGPTLEVLSAPSSHYARTLLANVPSLNPTPRPPRNHASDIIVSVENLVQTFPLS
GRKGEHFRAVDDVSFSVARGTTHAIVGESGSGKTTTARSLLGFHHPSAGRILIDGTDITH
LKGEALRQFRQKIQLVYQNPFGSLDPSQRLYDIVEEPLRNFNRHTAAQREQKIHEMFERV
ALPAALLSRKPRELSGGQRQRVAIARALVLEPQVLVLDEAVSALDVTVQAQILRLLAELQ
ESLGLTYLFISHDLAVVRQIADTVSVLYHGKQLESGPVEQIFAHPEHRYTRELIEAIPGQ
QHPAFARPHHSETKVALNQGQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcagccagcttacaaaccagtgcggcggtgcccgtactggctctggaaaac
gtcacgattgcctaccgcagtgacgatcgcgagcagaccgtcgtggaaggcgtctctttt
catattcagcccggtgaagtcgtcgcactggtgggggagtccggttcagggaaaaccacc
accgcacaggcggttatcggtttgctggccgagaacggacggttaacacgcggtgccatt
cggctcaacggcgtggatatcagcgactggtcgcagaagcggttggacagcgtgcgcggt
gcgcagatcagcctgatcccgcaggatcccaccagttccctgaatccggtgcagaccatc
ggcgagcaagtggacgaaattctgcgtattcatcagcgggaagatcgccagactatccgc
cagaaaacgctggcgctgctggaacgcgtggggctaaaccagccggagctgcgagcgaaa
cagtatccgcacgagctgtccggcggcatgaaacagcgcgtcctgatcgcgattgccatt
gcgctaaaacctgcgctgattattgctgatgagcccaccagcgcgctggatgtcaccgtg
cagaaacgtattctcgatctgcttgatgaactgcgacgcgaaaatgggacggcggtgctg
ttcgttacgcacgaccttggggtcgcggccgagcgtgccgatcggctgctggtcttccag
aacggctacattcaggaacaggggccaacgcttgaggtgctaagcgcgccctcaagccac
tatgcccgcacactgctggcgaacgtgccgtcgcttaacccaacgccgcgtccaccgcgc
aaccatgcatccgacatcattgtctcggtcgaaaatctggtacagaccttccccttatcg
ggtcgtaaaggggaacattttcgggccgtggatgacgtctctttcagcgtggcacgcggc
acaacgcacgccattgtcggcgaatccggctcgggtaaaaccaccacagcgcgcagcctg
ctcggatttcatcaccccagcgccgggcgcattctgatcgacggtaccgatatcactcac
ctgaaaggcgaagcgctacggcagttccggcagaaaattcagctggtctaccaaaatccc
tttggttcactcgatccctcacagcggttatacgacatcgtcgaggaaccgctgcgcaat
tttaatcgccataccgccgcgcagcgggagcaaaaaattcatgagatgttcgagcgcgtc
gccctgcccgccgcgttgctgtcacgcaagccgcgtgaactgtccggcggccagcgacaa
cgtgtcgccatcgcccgggcgctggtgctggaaccgcaggtactggtgctggacgaggct
gtctcggcgctggatgtcaccgtgcaggcgcagattctacgtttgctggctgaattgcag
gaatcacttgggctgacatatctgttcatttcgcacgatttggcggtcgtgcgccagatc
gccgacaccgtttccgtgctgtaccacggcaagcagcttgaatccggcccggtagagcag
atcttcgcccatcccgaacatcgctacacccgtgaactcatcgaggccattcccgggcag
caacacccggcttttgcccgcccgcatcactctgaaaccaaagtggcactaaaccaagga
cagtag
DBGET
integrated database retrieval system
