Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4227
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Entry
PC1_4227 CDS
T00934
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03030
DNA replication
pct03410
Base excision repair
pct03420
Nucleotide excision repair
pct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC1_4227
03410 Base excision repair
PC1_4227
03420 Nucleotide excision repair
PC1_4227
03440 Homologous recombination
PC1_4227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pct03032
]
PC1_4227
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_4227
Enzymes [BR:
pct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC1_4227
DNA replication proteins [BR:
pct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PC1_4227
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PC1_4227
NER (nucleotide excision repair)
GGR (global genome repair) factors
PC1_4227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACT15241
UniProt:
C6DJE2
LinkDB
All DBs
Position
complement(4778931..4781720)
Genome browser
AA seq
929 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHNMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKPVLISTGDKDMAQLVTPSVTLINTMNNSILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAELSFRGAKTMAPKLEQHK
DVAYLSYQLATIKTDVELDLSSEQLTVNEPDVDELHRLFSRYEFKRWLSDVESGTWLEGK
KSSQPVPAVSKVVVEQAAEESNAPALSADGYVTILDEETLLDWIERLKQAEVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRAKVLALFKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTTRLAELETQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DKGLLNAFANGLDIHRATASEVFGTALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDAPQVKMIMQVHDELVFEIHDSVIEESISK
IKTLMEGCMELNVPLQVDIGTGMNWDEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattgcagaaaaccctttaatactggtagacggttcatcctatttgtatcgt
gcttatcacgcttttccaccgttaacaaatagcgcgggagaagccaccggtgcaatgtat
ggcgtactgaatatgctacgcagtttgctgctgcaatatcagcccagccatgttgccgtt
gtttttgatgcgaaagggaaaacgtttcgcgatgagctgttcgaaaactataaggctcat
cgcccacctatgccagaggatctgcgcgaacagatagagcctctgcataatatggtgaaa
gcgatggggctgccgcttttggcggtttctggcgtagaagcggatgatgtgatcggcacg
cttgccgttcaggcggaaaaagcaggtaagccagtgctgatcagtaccggcgataaagat
atggcacagctggtgacgccaagtgtgacgctcattaataccatgaataacagcattctt
ggcccacaggaagtgtgtgataaatacggtattcctccagagctgattatcgatttcctt
gcgctgatgggagatgcgtcggataacattcccggcgtacccggcgtgggtgaaaaaacg
gcgcaggcgctattgcaaggtcttggtgggctggattcgctgtatgccaacctggataaa
attgccgagctctctttccgtggtgcgaaaaccatggcgccgaagctggaacagcataaa
gacgtggcctacctctcttatcagcttgccaccattaaaacggatgttgagttggatctc
agcagcgagcagcttaccgttaatgaacctgacgtagatgagctgcatcgtctcttttcc
cgttatgaatttaaacgctggttatcagatgttgaatccggtacctggctggaaggtaaa
aaaagcagtcagcctgttccggctgtgagcaaagtggttgttgagcaggctgctgaagag
agcaacgcgccagcgctttctgccgacggttatgtcacgattcttgatgaagaaacgctg
ctcgattggattgagcgtctaaaacaggctgaggttttcgcttttgatacggaaaccgac
gggctggatacgctcaccgccaatctgattggtttgtcatttgcgattaagccaggtgaa
gcggcttatttgccattagcgcatgactatctggatgcgccggaacagttggatcgcgcc
aaggtactggccttgttcaagccgctactggaagatgagaagctgcttaagattggccag
aatctcaaatttgataaaggcgtgatgcagcggtacgacattgatttgcgcggtatcgcg
tttgataccatgttggaatcctacgtgctcgacagcgtggcgggccgccacgatatggat
agtctggccgaacgctatctgaaccacaaaaccattacctttgaagagatcgcgggtaag
gggaaaaatcagctgacgtttaatcagatcgcactggaacaggctgggccttatgcggcc
gaggatgcggacgtcacgctgcatctgcatcagaagctgtgggggaaactgcaaccgcat
gccgacctgtgtcaggtcttccagactatcgatatgccgctggtgccagttttatcccgc
atcgagcgtacaggcgtgctgatcgatcctgcgattctggcggagcactcaaaagagctg
acaacccgtctggcggagctggaaacacaagcgtatgaactggcgggcgaagagttcaat
ctctcatcgaccaagcagctacagggtattctgtatgaaaagcaaaagctgccgattctg
aagaaaacgccaaaaggcgcaccgtcaactaatgaagaagtgttggctgaactggcgctg
gattaccctctgccgaagctgattctggaatatcgtggcttggccaagctgaaatctact
tacactgacaagttaccgctgatgatcaatccggcgacgaagcgtgtgcatacgtcttat
caccaggctgtcactgcgaccgggcgtttgtcttccagcgatcctaacctgcaaaacatc
ccggtgcgtaatgacgaagggcgccgtattcgtcaggcattcattgcgccgaagggctac
agcattgtggcggcggactactcgcaaatcgaactgcgtatcatggcgcacttatccggt
gataaagggctgttgaacgcgtttgcgaacggactggatatccaccgggcaacggcgtca
gaagtgtttggcactgcgctggataaggtgacatcagaacagcgtcgcagtgcgaaagcg
atcaactttggtttgatctacggcatgagcgcgtttggtctgtcgcgtcagttgaatatt
ccccgtagcgaatcgcagaaatacatgaacctgtattttgagcgctatccaggtgtgcag
gattacatggaacgcacgcgccaacaggccgcggaacatggctatgtgtctacattggat
ggtcgccgtctctacctgccagacatccattctcgtaatgcgatggcgcgtaaaggtgcg
gaacgtgcggcgattaacgccccgatgcagggcaccgctgctgacattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacgcaccgcaggtgaaaatgatcatgcag
gttcacgatgagctggttttcgagatccatgattcggttattgaagaatccattagtaaa
atcaaaacattaatggaaggttgtatggaattgaatgtcccgctgcaggttgacattggt
acgggcatgaactgggatgaagcacattaa
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