Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4240
Help
Entry
PC1_4240 CDS
T00934
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02020
Two-component system
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PC1_4240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_4240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pct02022
]
PC1_4240
Two-component system [BR:
pct02022
]
OmpR family
QseC-QseB (quorum sensing)
PC1_4240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
ACT15254
UniProt:
C6DJF5
LinkDB
All DBs
Position
4798050..4798712
Genome browser
AA seq
220 aa
AA seq
DB search
MRILLIEDDRLIGDGLKAGLNKLGFNIDWFTEGKAGAAALKAAPYDAVVLDLSLPGMDGM
DILRQWRQAGHDEPVLILTARDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRH
GQLQPALTHGAVSLEPGSRSVTLNNEPLILKSRELALLELFLLNPNRVLTRAQLEEKLYG
WDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGVGYILGDAP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgttaattgaagacgatcgcctgattggcgacggcctgaaagcagggctt
aacaaactgggttttaatattgactggtttacggaaggtaaagcaggtgccgctgccttg
aaggcagccccctatgatgcggtggtgctcgatcttagcctgccgggcatggatgggatg
gatatcctgcgccagtggcgtcaggctgggcatgacgaaccggtgctgattctgaccgcc
cgagatgcgctggaacagcgtgttgaaggtctgcagcaaggtgccgacgattatttatgt
aagccctttgcgctgacggaggttgccgctcgtctgcaggcgctgattcgccgtcgtcac
ggtcagcttcaaccggcattaacgcacggtgctgtttcccttgagccaggctcgcgaagc
gtcacgctaaacaatgaaccgttgatactaaaatcccgcgaactggcgttgctggagctg
tttttactcaacccgaaccgcgtgctcacgcgcgcgcagttggaagaaaagctctacggc
tgggacgatgatgtctccagcaatgcagtagaagtacacatccaccatctgcgcaaaaag
ctgggcagcgggtttatccgcaccgtgcatggcgttggctatattctgggagacgcacca
tga
DBGET
integrated database retrieval system
