Candidatus Protochlamydia amoebophila: PC_RS00500
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Entry
PC_RS00500 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC_RS00500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcu02000
]
PC_RS00500
Transporters [BR:
pcu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PC_RS00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CAF22827
UniProt:
Q6MF22
LinkDB
All DBs
Position
complement(166774..168921)
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AA seq
715 aa
AA seq
DB search
MNKEPISLYIFRFILGFGLFAFMAMLYWSSALIENQLKFLRQDLIQIKNDIYTVRSETEK
IRTDILKTLINHPLSQNSSSSETANFPLTINKKAAQGENLLKVDPFYQITLPRLLGPQFT
PQGVRKEATFRKPDHLHPFSPWLEVSSWNDLCSISLASQEVGKYETMAPEMAERIELRTN
EKGLSEYWVFLRQDVFWAPLQQNQFAEGIILAPHFLRRHPVTAHDFKFYFDAIMNPYVEE
AKAVSLRIYFGDIEEIKILDDYTFIVRWKTEKTVGENGKEELKMKYLSKSWTGSLCPLAS
FVYQYFADGTKIIEEDSHPNTYQTNSIWAQNFSHHWAKNVIVSCGPWLFDGMTEREIRFK
RNPDYFNAYAALTEALEFKFKNSPDGIWEEFKTDSLDLFEIPPNQLAELDRFLQSAPYAK
QKENGSGIHRLDYISRKYYYIGWNQANPLFKSKKVRQALTMAIDRERIIRQNLNGMGMQT
TGTFFPFSPSYDATLKPYPYNIQKALELLREDGWYDSSGTGVLEKVIDGQRTPFKFTLTY
FVKSPTNKSICEYISTALKEIGIVCKIEGVDVADLSAIVDDKSFDAIYMAWALGSPPEDP
RQLWYSTGAKEKGSSNLIGFVNQEVDHIIDKLTFEYDVEKRIELYHQFDRIIYDEAPYTF
IYTPKETLLYRDYLQNVFIPAERQDLIPGANVGEPIANLFWIKDTSKKQEKYLGN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagcctattagtttatatatcttccgatttatcttagggtttgggttattc
gcgttcatggctatgttgtattggtcatctgctctgattgaaaaccagttaaaattttta
agacaagacctgattcaaatcaaaaatgatatttataccgttcgttctgaaacagaaaaa
attcgtacggatatcttaaaaacacttattaatcaccctttaagccaaaacagttcttca
tctgaaacagccaatttccctttaacaataaacaaaaaagctgcgcagggtgaaaatctt
cttaaagtagatcctttttatcaaatcaccctccctcgattactaggacctcaatttacc
ccgcagggagttcgcaaagaggcaacgttcagaaaaccggatcatctccacccttttagc
ccctggttagaagtttcttcatggaacgatctgtgctctatttcattagcttcccaagaa
gtgggtaaatatgaaacaatggctccagaaatggctgaaagaatagaattaagaactaat
gaaaaaggtctttccgagtattgggtatttctaaggcaagatgtattttgggctcccctt
caacaaaatcaatttgctgaagggattattttagcccctcattttttacgccgacaccca
gtcactgctcatgactttaaattttactttgacgcaatcatgaatccatacgtggaagaa
gccaaagccgtttcccttagaatttactttggagatattgaagaaattaaaatactcgat
gattacactttcattgtgcgatggaaaacggaaaaaaccgtaggagaaaatggaaaagaa
gaactaaaaatgaaatatctgtcaaaatcttggacaggatctttatgtcctttagcttcc
tttgtttatcagtattttgcggatggcacaaaaattattgaagaagatagccaccctaac
acttaccaaactaattctatctgggcacaaaatttttcccatcactgggcaaaaaatgtc
attgtcagttgtggtccgtggttattcgatggcatgaccgaaagggaaatacgattcaaa
agaaatcctgattattttaatgcttatgctgccctaaccgaagcgctagaattcaaattt
aaaaactctccagatggaatttgggaagaatttaaaactgattctttagatttatttgaa
attcctcctaatcagcttgcagagttagatcgatttttacaaagtgccccttatgccaaa
caaaaagaaaatggatcgggaattcatcgattggactatattagtcgaaaatattattac
attggatggaaccaagctaaccccttatttaaaagcaaaaaagttcgacaagctttgacg
atggctattgatagagaacgcattattcgtcaaaatttaaatggaatgggaatgcaaaca
acgggaacctttttccctttttctccctcctatgacgcgacattaaaaccctatccttac
aatattcaaaaagctttggaattattaagagaagatggatggtacgatagttcaggaacg
ggtgtcttagaaaaagtcattgacggtcaacgcaccccttttaaatttacattgacatat
tttgtcaaaagcccaacaaataaatcaatttgtgaatacatttcgactgctttaaaagaa
attgggattgtttgtaaaattgagggggtagatgtagcagatttatctgctatagtggac
gataaaagttttgatgctatttatatggcttgggctcttggatcgcctcctgaagatcca
aggcagctgtggtattcaacaggagccaaagaaaaaggctcttcaaatctaattggtttt
gtcaatcaagaagtagatcatatcattgacaaattaacttttgaatatgatgtcgaaaaa
cgtattgaactttaccatcaatttgatcgcattatttatgatgaagctccctatacattt
atttatactcccaaagagactcttctttaccgcgattacttgcaaaatgttttcatccct
gctgaaaggcaagatttaatcccgggagctaatgtaggcgaacctattgcaaacttattt
tggattaaagatacttctaaaaaacaagaaaaataccttgggaactaa
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