Candidatus Protochlamydia amoebophila: PC_RS01225
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Entry
PC_RS01225 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcu03016
]
PC_RS01225
Enzymes [BR:
pcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PC_RS01225
Transfer RNA biogenesis [BR:
pcu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PC_RS01225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
SPJ31595
UniProt:
A0A2P9H9A9
LinkDB
All DBs
Position
complement(358326..358880)
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AA seq
184 aa
AA seq
DB search
MNSYILAINIPSSIQRQLAQICYGIPNVNWLDSNEFYLQLRSFGQLSLEKLEEIQKCLNS
LFFNSFSLQLKEIGHDHFKSQQGTIWVGANPILELIELKNQINKLLKELNLLPERHPNLK
VFLGHYYKVHADRLLEYLMNHFLFQTPFFTATKCSLLLIKTTTKRTFMEVIEEYEAASPA
TGED
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttatatattagctattaatatcccctcttctattcaaaggcaattagctcaa
atctgttatggcatccctaatgtaaattggttggattccaatgaattttatttgcagctt
cgctcttttggacagctttctttagaaaaattagaagaaattcaaaaatgcttaaattct
cttttttttaattccttttccttgcaattgaaagaaataggacatgatcattttaagtct
cagcagggaacgatttgggtgggagctaacccaattttagagttaattgagctgaaaaat
caaataaataagcttcttaaagagttaaatcttctcccagaacgccatccaaatttaaaa
gtttttttaggtcattattataaagttcatgccgatagattgttagaatatttgatgaat
cacttcttgtttcaaacaccttttttcacggctactaaatgctcacttcttcttattaaa
acaacaacaaaaagaactttcatggaagttattgaagaatacgaagcagcctcgccagca
acaggagaagattaa
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