Candidatus Protochlamydia amoebophila: PC_RS01330
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Entry
PC_RS01330 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K04485
DNA repair protein RadA/Sms
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcu03400
]
PC_RS01330
DNA repair and recombination proteins [BR:
pcu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PC_RS01330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
RecA
Lon_C
AAA_16
AAA_22
nSTAND3
CbiA
AAA_30
NACHT
NTPase_1
AAA_31
DAP3
Rad51
AAA
zf-RING_10
Fer4_NifH
NPHP3_N
SLFN-g3_helicase
AAA_5
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CAF22997
UniProt:
Q6MEK2
LinkDB
All DBs
Position
complement(384258..385628)
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AA seq
456 aa
AA seq
DB search
MAKQKTVWYCSECGHKQLKWLGQCPSCTNWNTFQEELELSSLPKRFESQTAITTRPIKLK
EVKLQETPRIQTKIGECDRLLGGGLVPGSLTLVGGDPGIGKSTLMLQLSYALAKQGLIVL
YICGEESVDQTSLRANRLGIQTDNLFLLSETNFSLIKSQIDQLNPDVLIVDSIQIVYKSE
ITSAPGSVTQVRETTTEFMHLAKGRGISTFLIGHVTKSGEIAGPRVLEHLVDTVLYFEGD
KQHHYRMIRVVKNRFGPTDEIAVFQMKQSGLVEVPNPSEIFLEERRKDSIGSVIIPTLEG
SRPILIEVQALVTQTVFSTPSRRCTGLDQNRLALLLAVLEKRMGYQLHKCDVFVSVAGGL
RIIEPAIDLGLLLASASSMRNSIIDPETTVVGEVGLGGEIRSVSRIESRLKEAIHMGFRR
CIIPKRNAKGIAEDILRKIVVQGVEFVEEAIDALLK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaaaaaactgtctggtattgctctgaatgtgggcacaaacaacttaaatgg
ttaggacaatgtccttcgtgtacaaactggaatacttttcaagaagaattagaattatct
tctcttcctaaacgttttgagtcccaaactgctattacaacccgccccatcaaattgaaa
gaagtaaaactccaagaaacaccacgtattcaaacgaagattggagaatgtgaccgttta
ttaggaggaggtcttgttccgggttcgctcactttagtgggaggtgatccaggtattgga
aaatccaccttgatgctacaactttcttatgctttagccaaacaaggacttattgtctta
tatatttgtggagaagagtctgttgatcaaacctctttaagagctaatcgattgggcatt
caaacagataatctatttttactttcggaaaccaatttctctttaataaaatctcaaatc
gatcaacttaaccctgatgttttaatcgtcgattcgattcaaatcgtttataaaagcgaa
attacttcagctccaggatcggtgacacaagtacgtgaaactacaacagagtttatgcat
ttagctaaaggacgtggaatttcaacatttttaattggacacgtcacaaaatctggcgaa
attgcaggtccaagagttttagaacatcttgtggatacggttctttactttgaaggtgat
aaacaacaccattatcgaatgattcgagttgttaaaaatcggtttggccctacagatgaa
attgcagtcttccaaatgaaacaatcagggctggttgaagtacccaatccttccgaaatt
tttttagaagaacgaagaaaagatagcataggatctgtcatcatacctacgttagaaggc
tctcgccctattcttattgaagtacaggctttagtgacgcaaacagtctttagtactcct
tcacgaagatgcacaggattagatcaaaatagacttgctctactacttgctgtgcttgaa
aaaaggatgggatatcaacttcataaatgtgatgtttttgtttctgtcgcaggaggtcta
agaattatagaacctgccatcgatctaggccttcttttggcttcggcttcttccatgcgt
aattcaatcattgaccctgaaacaactgtcgttggagaagtgggtttgggaggcgagata
cgaagcgtttcgagaattgaaagtcgacttaaagaagccattcatatgggatttagacgt
tgcattatccctaaaagaaacgctaaaggaattgctgaagatattcttcgaaagattgtg
gtacaaggcgtagaatttgttgaggaagcgatcgatgctttactcaaataa
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