Candidatus Protochlamydia amoebophila: PC_RS01600
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Entry
PC_RS01600 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcu03016
]
PC_RS01600
Enzymes [BR:
pcu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PC_RS01600
Transfer RNA biogenesis [BR:
pcu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PC_RS01600
Prokaryotic type
PC_RS01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CAF23052
UniProt:
Q6MEE7
LinkDB
All DBs
Position
448130..448900
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AA seq
256 aa
AA seq
DB search
MHCYKLTIAYDGTNYSGWQIQPNASSIQQKIQEALCILLKKEKVVLVGSGRTDAGVHAKG
QVAHFHFQDYIDLSRLHVSLNGLLPRDIRIKAVEPVSPRFHSQYSAIRKEYHYYLHLNKV
MDPFQRLYSWHFQRKIDVNILKKAAILFTGTHDFTSFANEAHRGTAAKNPVRTLYRLDIK
PNEGGLRLEFEGDGFLYKMVRNIVGTLMDVASHKRAIEEINQIFAAKNRRQASLAAPPEG
LFLIQVFYENENGCLD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcattgctataaattaacgatagcttacgatggaacgaactacagtggatggcaaatc
caacctaatgcttcttccatccaacaaaaaattcaagaagctctttgcattcttttaaaa
aaagaaaaagttgttttggtaggttcaggacgcacggatgctggagttcatgccaaaggg
caagtagctcattttcattttcaagactatatcgatctatcacgccttcacgtttcctta
aatggattattgccgcgcgatattcgtattaaagcagttgagcctgtttcacctcggttt
cattcgcagtacagtgcaattcgaaaagaatatcattattatttgcatttaaataaagtg
atggacccttttcaacgtttatatagctggcatttccaaagaaaaatagatgtaaatata
ttaaaaaaagcggctattttatttacgggcactcatgattttacctcatttgctaatgaa
gctcacagaggaactgcagctaaaaatccagtaagaactctttatcgtttagatatcaaa
ccaaacgaaggaggccttcgattagaatttgaaggggatggatttttgtataagatggta
agaaacatcgttggaactttaatggatgttgcttcacataaaagagctatagaagaaatt
aatcagatttttgctgctaaaaatcgtcgtcaggcaagccttgctgctccacctgaagga
ctttttcttattcaagttttttacgaaaatgaaaatggatgtttggattaa
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integrated database retrieval system
