Candidatus Protochlamydia amoebophila: PC_RS01670
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Entry
PC_RS01670 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PC_RS01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcu03400
]
PC_RS01670
DNA repair and recombination proteins [BR:
pcu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PC_RS01670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PC_RS01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
LIM
Motif
Other DBs
NCBI-ProteinID:
CAF23064
UniProt:
Q6MED5
LinkDB
All DBs
Position
463657..464352
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AA seq
231 aa
AA seq
DB search
MLSEFQTAEGIILKVIPFRDYDQILAIFTKEAGLIKVLCKKSRNKKGGAKSHYTPLTKVE
LVYKEQKGEIFNCHEISILDFYRHLRTELSHLNAACDIIQLLYQTQLVGKPAPRLFTLTE
IYLKKIPQTQFPDILTTSFRLKLLKHEGILAHPLVCSVCLQPLHQEAFFFRGEVFCRLHY
PMGASHLRENEINVLYQLLNCKNYQELTEITLFSQTKNKIERYCKETMQKQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagaatttcaaacggctgaaggtattattttaaaagtcattccttttcgtgat
tatgatcagattttagccatttttactaaggaagctggcttaatcaaagttttatgcaaa
aagagtcgaaataaaaaaggaggggcaaagagtcattacacgcctttaacaaaggtggaa
ttggtttataaagaacaaaaaggtgaaatttttaattgtcatgaaatatcaattttagat
ttttaccgtcatttacggaccgaactcagtcatttaaatgctgcttgtgacatcatacag
cttctttaccagacgcaattagtaggaaagcctgctcctcgactttttactttgactgaa
atttatttgaaaaaaattccccaaacccaatttccggatattttaaccacaagcttccgt
ttaaaactactaaagcatgaaggaattttagcccatcctttggtctgcagtgtttgccta
caaccacttcatcaagaagcttttttttttcgaggggaagtattttgtcgtttacactat
cctatgggagccagccatttacgtgaaaacgaaataaatgtattatatcaattattgaat
tgtaaaaattatcaagaattaactgaaattactcttttttctcaaacaaaaaacaaaatt
gagagatattgcaaagaaactatgcaaaaacagtaa
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