Candidatus Protochlamydia amoebophila: PC_RS02165
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Entry
PC_RS02165 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu00260
Glycine, serine and threonine metabolism
pcu00630
Glyoxylate and dicarboxylate metabolism
pcu00670
One carbon pool by folate
pcu00680
Methane metabolism
pcu01100
Metabolic pathways
pcu01110
Biosynthesis of secondary metabolites
pcu01120
Microbial metabolism in diverse environments
pcu01200
Carbon metabolism
pcu01230
Biosynthesis of amino acids
pcu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PC_RS02165
09102 Energy metabolism
00680 Methane metabolism
PC_RS02165
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PC_RS02165
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PC_RS02165
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PC_RS02165
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PC_RS02165
Enzymes [BR:
pcu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PC_RS02165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CAF23168
UniProt:
Q6ME31
LinkDB
All DBs
Position
complement(572695..574170)
Genome browser
AA seq
491 aa
AA seq
DB search
MSRLKKYLSSKTSNQQNSAAIAYLAALDHIETVSPTISSSIIQELQDERSHLKLIASENF
SSLAVQLAMGNLLTDKYAEGYAHHRFYAGCDNIDSIEETASQELIQLFGCEHAYVQPHSG
ADANLVALWAILIHKIQNPEIEKFGKKTLDELTPEEYEKIRQLLVNQKLMGMSLNSGGHL
THGYRHNISSKMMRSVLYDVDPKTEILDYSVLAKQVQQERPTILIAGYSAHPRRLNFAKM
REIADSVGATLMVDMAHFAGLVAGKVFQGEFDPIPYADIVTSTTHKTLRGPRGGFVLCKQ
SFSEAINKGCPSVLGGPLPNVMAAKAVAFKEANSLNFKQYSQKIVDNAQSLANCFLQNDI
RLVTGGTENHLMILDLSKFGLTGRQAETALREAHITVNRNAIPNDLQGPWYTSGIRLGTA
ALTTLGMGKDEMNEIASVIFSVLSNSKPGIVQKTGQPSKASVITDSTIINEAKARVKNLL
IHFPLYPEIEI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacttaaaaaatatctctcttctaaaacaagcaatcaacaaaattcagcagcg
attgcttatttagccgctcttgatcatattgaaactgtctcccctactatttcttctagt
attattcaagaattacaagatgaacgctctcatctaaaacttattgcatctgaaaacttt
tcgtctttggctgttcagttagcaatgggtaaccttttaactgacaagtatgctgaagga
tatgcacatcaccgattttatgcgggatgcgataacatagatagcattgaagaaacagct
agtcaagaattgattcaattatttggatgtgagcatgcctatgttcaaccccattcagga
gctgacgcaaatttagtggcactatgggccatcttaatccataaaattcaaaatccggaa
attgaaaaatttggaaaaaaaactttagatgagttaactcccgaagaatatgaaaaaatt
cggcaacttctcgttaatcaaaaactcatgggcatgtccttaaattccggggggcattta
acgcatggatatcgccataatatctcatctaaaatgatgcgttctgtcttatatgatgtt
gatcccaaaaccgaaattcttgattactctgtacttgcaaaacaagtgcaacaagaaaga
ccgacaattcttattgctggttattcggctcatccaaggcgacttaatttcgctaaaatg
cgtgaaattgcagatagtgtaggagctactttgatggtagatatggcccactttgccggt
ctggtagccggaaaagttttccaaggcgaattcgatcctattccttatgcagatattgtg
acttctactacgcataaaacattgagaggcccaagaggaggttttgttttatgtaaacag
tcctttagcgaagccattaataaaggttgtccgtcagttcttggagggccacttcccaac
gttatggcagcaaaagccgtcgcttttaaagaagcaaactcccttaattttaaacagtac
tcacaaaaaattgttgataatgctcaatccttagccaattgctttcttcaaaatgacatt
cgtcttgttaccggtggaacagaaaaccatttaatgattctcgatttatctaaatttgga
ttaaccggtcgtcaagcagaaactgcattaagagaagcccatatcacagttaacagaaat
gcaattccaaatgatcttcaagggccttggtacacatctggaattcgtttaggaacagca
gctttaacaaccttgggaatgggtaaagatgaaatgaatgaaattgcttctgttattttc
tctgtcctatcaaactctaaacctggcattgttcaaaaaactggacaaccaagcaaggct
tcagtcatcacagattccacaattatcaatgaagcaaaggcacgagtaaaaaatttatta
attcatttccctctctatcctgaaatagaaatttaa
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