Candidatus Protochlamydia amoebophila: PC_RS02895 Help Entry PC_RS02895        CDS       T00172                                  Name (GenBank) unnamed protein product   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism pcu  Candidatus Protochlamydia amoebophila Pathway pcu03020   RNA polymerase Brite KEGG Orthology (KO) [BR:pcu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PC_RS02895  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcu03021]     PC_RS02895    03400 DNA repair and recombination proteins [BR:pcu03400]     PC_RS02895 Enzymes [BR:pcu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PC_RS02895 Transcription machinery [BR:pcu03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      PC_RS02895 DNA repair and recombination proteins [BR:pcu03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       PC_RS02895 SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 Motif Other DBs NCBI-ProteinID:  SPJ31670 UniProt:  A0A2P9H9I9 LinkDB All DBs Position 759383..763144 Genome browser AA seq 1253 aa AA seqDB search MQRPPHRESFNDKEEIIDLPNLIEIQIKSYNQFLQADKFPDERENIGLQEVFTEIFPIKS YDEKTILEFLSYNLGVPKYNPEECIRRGITYNVTLKVKFRLTDETGIKEEEVYMGTIPVM TDKGTFIVNGAERVVVSQLHRSPGICFEQERHSRGNVIYSFRIIPYRGSWLEGAFDTNDL IHIYIDRKKRRRKILATTFIRALGYSSNSDIIEEFFTTRKYKIKNEKEFAKLVGKILAQD VVDEESGLVFGKASEKLTTAMLKRIVDAGIDVIRIAEDADETSPVIKMLAKDPTDSYESA LKDFYRKIRPGEPATLSNARSAIMRLFFDPKRYNLGRVGRYKLNSKLGCEINDEKLQTVT LDKEDVIGALKYLIMLKSGSEEASIDDIDHLGNRRVRSVGELIQNQCRIGLARMEKIIRE RMNLFDFSSDTLTPGKIVSAKGLSGVLKDFFGRSQLSQFMDQTNPIAELTHKRRLSSLGP GGLNRDRAGFEVRDVHTSHYGRICPIETPEGPNIGLISSLSSFAKINEFGFIETPYRIVR EGVVTDEIEYMTADQEEQCVIAQASAPLDEYHMFAEPICWARYKGEQFETDTKNVTHMDV SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQGVPLLKPTAPIVGTGLEARAARDSGAV LIAHEDGVVDYVDGLKIVISPDDNRLEKRTYLLKKFIRSNAGTCINQRPLCHVGDKIKAG DVIADGPATDKGEVALGRNVLVAFMPWFGYNYEDAIIISEKLLREDYYTSLYIEEFELTA RDTKLGKEEITRDIPNVSEETLRNLNDDGIIRIGAEVKPGDTLVGKITPKSETELAPEER LLRAIFGDKASDVKDASLIAPPGTEGVVMDVKVFSRRDRLSKTDDELVEEASKLKDIQRE YKSNQAQLRTEKHERVGALLLNETAPGNIVHRRTAEIIVDEGDLITQDLIEALEKESVED LLMPENDIYTTLRQILHDYEIALQTVETQYKTQLEFMRKGDTDLDPGVIRQVKVYVASKR KLQVGDKMAGRHGNKGVVSKIVPEADMPFLSTGQTIEIILNPLGVPSRMNMGQLFETHLG IAAKHTGITVKSPVFEGFPEEKIWEMMKKAGLPEDGKFFLYDGCSGERFDNSVVVGYIYM LKLSHLVADKIHARAVGPYSLVTQQPLGGKAQMGGQRFGEMEVWAAEAYGAAHLLQEMLT VKSDDVAGRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLNVYTEAVDDS NT seq 3762 nt NT seq  +upstreamnt  +downstreamnt ttgcaaaggccgccacatcgcgagagttttaatgataaggaagaaattatcgatcttcca aatctgatagaaattcagatcaaatcatacaaccaatttcttcaagccgataaatttcct gatgaaagggaaaatattggcttacaagaagtttttaccgaaatttttccaattaagtct tatgacgagaaaactattttagaatttttgtcatataacctaggagtgcctaagtataat cctgaagaatgtattcgccggggaattacttataatgtcactttgaaagtaaagtttcgt ctaacagatgaaacgggaattaaagaagaggaagtctacatgggaacaattcctgtgatg actgataaaggaacatttattgttaatggtgcagagcgtgttgttgtttctcaacttcat agatctccaggaatatgctttgaacaagaacgccattctcgtgggaatgtaatctactca tttcgtatcatcccttaccgaggaagctggcttgaaggagctttcgatacaaatgactta attcacatctacatcgatcgtaaaaaacgacgccgcaaaatccttgcgacaacttttatt cgtgctttaggttattcttctaacagtgatattattgaagaatttttcacaactcgtaag tataaaattaaaaacgagaaagagtttgctaaacttgttggtaaaattctagctcaagat gttgtcgatgaagaatcaggactggtatttggtaaagcttctgaaaaattaacgacagct atgcttaaacgtattgtggatgctgggattgatgtcattcgtatcgcagaagatgctgat gaaacaagccctgttattaaaatgcttgcaaaagatccaacagattcttacgaatccgct ttaaaagatttttatcgtaaaattcgtccgggtgagccagcaactttatctaatgcccgt tcagcaattatgcgtctcttctttgatccaaagcgttataatctcggacgtgttggtcgt tacaagctcaacagtaaattaggttgtgaaattaatgatgagaagttacagacggtcaca ttagataaagaagatgtgattggagctctgaaatatttgatcatgttaaaaagtggtagc gaagaagcctcaatcgatgatatcgatcatttgggcaatcgtcgtgttcgttccgttgga gaactcattcaaaatcaatgccgcattggtttggcacgaatggagaaaattattcgggaa agaatgaatctttttgacttttcatcagatacattaactcctggtaagattgtctccgca aaagggttgtcaggagttttaaaagatttctttggccgttcacaactttcacaatttatg gatcaaacaaatccaattgcagagttaactcataaacgaaggctttcatctcttggacct ggtggtttaaatagagatcgtgctggatttgaagtgcgagacgttcatacaagtcattat ggacgtatttgcccaatcgaaacacccgaaggaccaaatattggtttgatctcttctctt tcatcatttgctaagattaatgaatttggatttattgaaacaccttatagaattgttcgt gagggggttgtaacagatgagatcgaatacatgacagccgatcaagaagaacagtgcgtg attgcgcaggcttctgctccgctggatgaataccatatgtttgctgaacccatctgttgg gctcgttataaaggtgagcaatttgaaacagatacgaaaaatgttacacatatggacgta tcgccgaagcagcttgtttcgattgttaccggattgattccattccttgagcacgacgat gcgaaccgtgcattgatgggatcaaacatgcaacgtcagggagttcctcttctcaaacct actgctccaattgtaggtactggattggaagctagggcagcacgtgactcaggagctgtt ttaattgcccatgaggacggagttgttgattatgttgatggtttaaaaattgttatttct cctgatgacaatcgtttagaaaaaagaacttatttgcttaaaaagtttattcgttctaac gcaggtacttgtatcaatcaacgccctctctgccatgtgggtgataaaataaaagccgga gatgtgattgcagatggaccagcaacagataaaggggaagtggcgcttggacgtaatgtc ttagttgccttcatgccttggtttggttacaactatgaagatgcgatcatcatttctgaa aaacttcttcgcgaagattattatacttctctctacattgaagaatttgaattaacggcg cgtgatacaaaacttggaaaagaagaaattacacgcgatattccgaatgtatcagaggaa acattaaggaacttaaatgacgatggaattattcgtatcggagcagaagtaaagcctggc gatacattagttggtaaaattaccccaaaatccgaaacagaattagccccagaagagcgt ttactacgcgcgatttttggtgataaagcttctgatgttaaagatgcatctttgattgct cctcctggaacagaaggggtcgttatggatgttaaagtctttagtagaagagataggcta tctaagactgatgatgaacttgttgaagaagcttcaaaattgaaagatattcagcgtgaa tataaatctaatcaagcccagcttcgtactgaaaaacatgaacgagtaggagctcttctt ctgaatgaaacagctccaggtaatattgttcatcgtcgaacagcggaaattattgtcgat gaaggagatttaatcacacaagatctcattgaagctttggaaaaagagagtgtagaagat ttattgatgcctgaaaatgacatctatacaacgttacgacaaattttacacgattatgaa attgctctgcaaaccgtggaaacacagtataaaactcagttagagtttatgcgtaaagga gatacagatttagatccgggtgtcattcgtcaagtcaaagtctacgtagcttctaagcgt aagttgcaagttggtgataaaatggctggtcgccatggaaataaaggggtcgtctccaaa attgttccagaagccgacatgccattcctttcaactgggcagacaattgaaattattctt aatcctttgggcgtaccttcacgtatgaacatgggacagttgtttgaaactcacttagga attgctgctaagcatacgggaataacagtaaaaagccctgtatttgaaggtttcccagaa gagaaaatttgggaaatgatgaaaaaggcgggtcttccagaagatggtaagtttttcctt tatgatgggtgctctggtgagcgctttgataatagcgttgtggtaggttacatttatatg ttgaagttgagccacttagtagctgataagatccacgctcgtgcagttgggccttattca cttgtgactcagcaaccattgggtggtaaagctcaaatgggtggtcaacgttttggagag atggaagtttgggcagccgaggcttatggagccgctcatctcttacaagaaatgctaact gttaaatctgacgatgtagctggtcgtacacgtatttatgaatcaatcgtgaaaggggaa aacctgcttaaatcaggaacaccggaatcttttaacgtattgattaaagaaatgcaaggg cttggcttaaatgtctatacagaagccgttgatgactcttga

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