Candidatus Protochlamydia amoebophila: PC_RS03220
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Entry
PC_RS03220 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcu03400
]
PC_RS03220
Enzymes [BR:
pcu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PC_RS03220
DNA repair and recombination proteins [BR:
pcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PC_RS03220
Prokaryotic type
PC_RS03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1848
Motif
Other DBs
NCBI-ProteinID:
CAF23396
UniProt:
Q6MDF3
LinkDB
All DBs
Position
837228..838643
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AA seq
471 aa
AA seq
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MTNPSIVWFRQDFRLEDNPALNAATQKGGPVIPVFNWVFNPEKEWQLGGASQWWLYYSLI
SLKNDLSELGLSLIIRKEDPLKSLLEIAHETGADTVYWNRRYEPMLIQDDAKIKTELQKQ
GIKAHSFNGNLLFEPWTIANKQGKPFQVFTPFWNQCLKLNDPEVPLPVPHSLKKFVGQLQ
TESIDSLNLLPKIKWDKGLKEVWSPGAKSAKALLKKGLTGVIDQYLDIRDLPDHDGTSLL
SPYLHFGEISPRMIWQAVKENSTSKGAEGYLRQIGWREFAHHLLYHFPETPQKPLRSQFN
SFSWKNDKQNLKAWQKGQTGYPIIDAGMRQLWKIGWMHNRVRLIVGSFLVKDLMIHWIEG
AKWFWDTLVDADLANNTMGWQWIAGCGADAAPYFRIFNPITQGEKFDPEGNYVKKWVPEL
INLPKEWLHQPWEAPEEILRQSGIELGINYPKPIVNHAKAREEALQAYSRL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatccctccattgtttggtttcgacaagattttcgtttagaagataatcctgct
ttaaatgctgccactcagaaaggtgggccggtcattcctgtatttaattgggtttttaac
ccagaaaaagaatggcaattaggaggtgccagtcaatggtggctttattattctttaata
agtttaaaaaatgatttaagtgaattaggtctctctttaattattcgaaaagaagatcct
ttaaaaagtcttttagaaattgctcacgagaccggagctgatacagtttattggaatcgt
cgttatgagcctatgttaatacaagatgacgctaaaataaaaacagaattgcaaaagcag
gggataaaagcgcatagttttaatgggaatttattgtttgaaccttggaccattgcgaat
aaacaaggaaaaccttttcaagtattcactccattttggaatcagtgtttaaaattaaat
gatccagaagttcctttgcccgttccacattcgttaaaaaaatttgtaggtcaacttcaa
acagagtccattgattctttaaatctattacctaaaattaaatgggataaaggacttaaa
gaagtttggtctcccggtgctaaaagtgctaaagctttattaaaaaaaggattaacagga
gttatagatcaatacttggacattcgcgatttaccagatcatgatggaacatccttactt
tctccttatttgcattttggagagatttctccgcgcatgatttggcaggctgtcaaagaa
aattcaacttcgaaaggagcagagggatatttaagacaaattggctggagagaatttgcc
catcacttactttatcattttccagaaacaccgcaaaagccattaagatcgcagtttaat
tccttttcttggaaaaatgataagcaaaatttgaaagcttggcaaaaaggtcagacaggg
tatcctattattgatgctgggatgaggcaactttggaaaataggttggatgcataatcgt
gtccgattgattgtcggttcttttttagttaaagatttgatgattcattggattgaagga
gctaaatggttttgggatacattagttgacgctgatttagcgaataatacaatgggatgg
caatggattgcaggttgtggtgcagatgcagcgccttattttcgtattttcaatcctatt
acgcaaggtgagaaatttgatcccgaaggaaattatgtcaagaaatgggttccagaatta
attaatcttcccaaggagtggctacatcaaccttgggaagctcctgaagaaatattgaga
caatcagggattgaattaggaataaactatcccaaacctatagtcaatcatgcgaaagct
agagaagaagctttacaggcttactctcgcttataa
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