Candidatus Protochlamydia amoebophila: PC_RS03395
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Entry
PC_RS03395 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcu03009
]
PC_RS03395
Enzymes [BR:
pcu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PC_RS03395
Ribosome biogenesis [BR:
pcu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PC_RS03395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
CAF23430
UniProt:
Q6MDB9
LinkDB
All DBs
Position
879056..879952
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AA seq
298 aa
AA seq
DB search
MPDALDWVVSNEESGSKLVSFLSKQLSPHYSSRQLKRMIEQNDCQVNGRIERFASTFLGT
GDRVSLNLKNPQQTFNRQLEQSRILYEDEDLFIYDKPAEMNCDEQGIIALLRPSFPSIQL
IHRLDRQTTGVLALAKNKTTFEALVNQFKQLKVSKSYRAIVDGILTSSKGHIENYLGKKH
VYQGQSIWGEVPSFQGLYASTYWSCLEIGKKASLVRCFPKTGRTHQIRVHLAGLGHPILG
DYQYGKKFTCLYNPPRYLLHAEEMGFIHPRTRQKLIVQAILPEDFLGAYKKLFEGKTA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgcattagattgggtggtttcaaatgaagaatcaggcagtaaactggtctcg
tttttaagcaagcagttaagcccccattattcttctcgtcaactcaaacgcatgattgag
caaaatgattgtcaagtcaatgggcgcatagaacgatttgcttctacttttctaggaaca
ggggatagagtttctctgaaccttaaaaatcctcaacaaacttttaatcgtcaattagag
caatctcgcattctttatgaagatgaagatttatttatttatgataaacctgctgaaatg
aattgtgatgagcagggaattattgcactactaagaccctcttttccatccattcaatta
attcaccgtttagatagacagacaacaggagtgttagctttagcaaagaataaaactact
tttgaagctctagttaatcagtttaaacagttgaaagtgtctaaaagttatcgggccatt
gttgacgggatattaacgtcatctaaagggcatatagaaaactatttaggaaaaaaacat
gtgtatcaaggacagtcgatttggggagaagttccttcttttcaaggattgtatgcctct
acgtattggagctgtctagaaataggcaaaaaagcttcattggtcagatgctttcccaaa
acaggaagaactcatcaaattcgtgttcatttggcaggtcttggacatcccattttaggg
gattatcagtatggaaaaaaattcacatgtctttacaatcctccaagatatttactacat
gctgaagaaatgggttttatccatcccagaacaagacaaaagttgattgttcaagcgatt
ttgccagaggattttttaggtgcgtataaaaaactatttgaaggaaagacagcttga
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