Candidatus Protochlamydia amoebophila: PC_RS03660
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Entry
PC_RS03660 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcu03021
]
PC_RS03660
03009 Ribosome biogenesis [BR:
pcu03009
]
PC_RS03660
Transcription machinery [BR:
pcu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PC_RS03660
Ribosome biogenesis [BR:
pcu03009
]
Prokaryotic type
rRNA transcription factors
PC_RS03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
HHH
S1
KH_NusA_C
KH_KhpA-B
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CAF23486
UniProt:
Q6MD63
LinkDB
All DBs
Position
complement(961776..963050)
Genome browser
AA seq
424 aa
AA seq
DB search
MNKDLIAIFEYLEREKGIKRELVISAIEESLQAAARKSVSGASNVTVTIHPKTGNIDVYC
EKEIVDDVEVPSQEISLLAAREIDPDAEIGQFIDIVVTPKDFGRIAAQKARQIITQKLRG
AERDVIYEEYRHRINELISGTIKRFVRGSNLIIDLGKVEAILPTREYPKTEKYQVGEKVL
ALVLEVKDTENGGAEVILSRSHPEFVKQLLVQEVPEVSDGTIIIDKIVRDAGYRTKLTVR
STDLKVDPVGACVGMRGNRVKNIVRELHNEKIDIIPFSNDPIELLQNALSPIEIRKINLN
EEDGIISIVVEDDDFAAVIGKKGMNARLNSRLIGYDLEVQRMTDYNRAMAIERNELAATD
DPTLDQPLVGIEGINSLIFDHLVDAGYHTLKSLLTATPKELAAIPGISLEMADKILEQIR
KQRT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagatctgattgcaatctttgaatatttagaacgagaaaaaggcattaagcga
gagcttgttatcagtgcgattgaagaatctttacaagcagcagctcgtaaaagcgtgagc
ggagcctccaatgtaacagtcactatccatccaaaaactgggaatattgatgtttattgt
gaaaaggaaattgtggatgatgtagaagttccctctcaagaaatttctttactagcagcg
cgtgaaattgacccagatgctgaaattggacagtttatcgacatcgttgtgactcccaaa
gattttggtcgaattgctgcgcaaaaagcccgtcaaattattacacaaaaacttcgcggg
gctgaaagagatgtaatttatgaagaatatcgccaccgaattaacgaactgatttcagga
acaattaagcgatttgttagaggttctaatttaattattgatcttggaaaagttgaagcg
attttaccaacccgggaatatcctaaaactgaaaaatatcaagtgggtgaaaaagttcta
gcccttgttctcgaagttaaagatactgaaaatggtggcgctgaagtgattttatcacgt
agccacccagagtttgtaaaacaacttttagtacaagaagttccggaggtaagtgatgga
acaattattattgacaagattgttcgtgatgcaggttatcgcacgaaactaaccgttcgc
tcgactgatttgaaagttgatcctgtcggagcttgcgttggaatgaggggcaatcgcgta
aagaacattgtacgtgaacttcataacgaaaaaattgatattattcctttttcaaatgat
cctattgaacttttgcaaaatgccctatctcccatagaaattcgaaagatcaatttaaat
gaagaagatggtatcatttctattgttgtagaagacgatgattttgcagcagtcattggt
aaaaaaggaatgaatgcgcgccttaatagtcgacttattggatatgacttagaggtacag
cgtatgacagattataatcgtgccatggcaattgaaagaaacgaattggctgcaacagat
gacccaactcttgatcaacccttggtaggtattgaaggaatcaacagtttaatctttgac
catctggttgatgctggttatcatacattaaaatctctgctaacggcaactcctaaagaa
ttagccgcaataccaggcattagccttgaaatggcagataaaattttagaacaaataaga
aaacaaaggacatag
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