KEGG   Candidatus Protochlamydia amoebophila: PC_RS04575
Entry
PC_RS04575        CDS       T00172                                 
Name
(GenBank) unnamed protein product
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pcu  Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:pcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcu03400]
    PC_RS04575
Enzymes [BR:pcu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PC_RS04575
    5.6.2.6  RNA 3'-5' helicase
     PC_RS04575
DNA repair and recombination proteins [BR:pcu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PC_RS04575
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: CAF23673
UniProt: Q6MCM6
LinkDB
Position
complement(1166623..1169037)
AA seq 804 aa
MTLPKHSLIEQWFNFKKWEPLPFQKEAWLKFLEGKSGLISVPTGAGKTYAAYLSALSKLH
EDPKKGIQILYITPLRALAKDLESALKAPIDDLKLIYRVERRTGDTSYIKKEKQNKHPPE
ILITTPESLAVMLCNGHATSQFSYLQSIIVDEWHELLASKRGVLFELCLSRLKAWKPSVQ
IWGLTATIGNIQQAAQVCVGVDRSPIIVNAKMEREVILTAVLPESLDKLPWTGRLGLRLL
PYVLNRLNFNQSTLIFTNTRSQTERWYQAILEARPEWKNLIAIHHSAIDKKTREGIEEGI
KFGSIRFVVCTSSLDLGIDLPRVEKVIQIGSPKSVARLLQRAGRSSHRPLTPCYIEVVPT
HALELIEIQAYRLAIKEHHIESRLPLKNCYDVLMQHMMTCAIGEGFQKDELFSQIKTTAC
FQDLSLKDFEDCLHFLISGGNSLKAYPEYKKLVYSNDKYIVEDKGLIRRHKMSIGTISSD
SQITVKWTKGKAIGMIEESFLTNLKPGDHFLFGGKQLQLVQYRDMTAYVRLAKHKQKHAA
VWRGSHLPFSASLGVELRKVCEQKISLNSSDQEKFLLDQIIQLQQKFSYLPTTKQLLIEL
TKSQEGWHLFVYPFEGKIIHQGLALLVAHRLSKKASQTFTISTNDYGFELLSRKSFQEEM
LTTELFSTQYMNEDIQELINTQEIGKRYFRDIARIAGLIFPGYPHKHKTNRQVQISSSLL
FDVLQKYDANNLLLQQAKKEVLDIQFEKIQLKNCLTRLSQAQLMIKKLKKFSPFGLELFV
ERVNDTLSTESLTERIKQIQNSWF
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgactcttcctaagcattcactcattgaacaatggtttaattttaaaaaatgggaacct
cttccctttcaaaaagaagcctggttaaaatttttagaaggaaaaagtgggttaatttct
gttccgacaggggctggtaaaacatatgctgcttatctttcagctctttctaagcttcat
gaagatcccaaaaaaggaattcaaatcttatacatcactcctttaagggctttagcaaaa
gatttggaaagcgctcttaaagctcctattgatgatttaaaattgatttaccgcgtcgaa
aggcgcacaggagatacttcctatataaaaaaagaaaagcagaataaacatcccccagaa
attttgattacgactcctgagagtttggctgtgatgctttgcaatggtcacgcaacttct
caatttagctatctacagtccattattgtcgatgaatggcatgagctgttagcttctaaa
agaggcgtcttgtttgagctttgtctatctcgattaaaagcttggaaaccttccgtacaa
atttggggattaaccgcgacaattggcaatattcagcaagctgcacaagtttgtgtagga
gttgatcgcagtcccatcattgtaaatgcaaaaatggaacgagaagtcatcttaacggct
gtattgccagaatctttggataagctcccgtggacaggaagattgggtttacgattactc
ccttacgttctaaatcgactaaacttcaatcaatctactcttatttttactaatacacgc
tcgcaaacagaaagatggtatcaagcgatattagaggcgaggcctgaatggaaaaactta
atagccattcatcatagtgccatcgataaaaaaacaagggaaggaatagaagaggggatt
aaatttggttcgattcgttttgttgtttgcacctcttctttagatttaggaatcgattta
ccaagggttgaaaaagtcattcaaattggctcccctaaaagtgttgcacggcttcttcaa
agagctgggcgctcttctcatcgccctcttacgccttgttacattgaagttgttcctaca
catgccctagaattaatcgaaattcaagcttatcgactagctattaaagaacatcatatt
gaaagccgtttgcctttaaaaaattgctatgatgttttaatgcagcacatgatgacatgt
gcaattggagaaggttttcaaaaagatgaacttttttctcagataaaaacaacagcttgt
tttcaagatttgagtttgaaagattttgaagattgcttgcattttttaatttcgggagga
aattctttaaaagcttaccctgaatataaaaagctagtttattcaaatgacaaatacatt
gttgaagataaaggattgattcgtcggcataaaatgagtatcggaaccatttcttctgat
tctcaaattaccgttaaatggaccaaaggaaaagcgattggaatgatagaagaatctttt
ttgacgaatttaaaacctggagatcattttctttttgggggaaaacaattacagttagtt
caatatcgagacatgacagcttatgttcgtttagccaaacataagcaaaaacatgcagcc
gtttggagaggaagccatcttcctttttcagcgtctttaggagtagagctaagaaaagta
tgtgagcaaaaaatatcgcttaactcgtccgaccaagaaaaatttcttttagatcaaatc
attcaattacaacaaaaattttcgtatcttcctacgacaaaacagcttttgattgaatta
acaaagtctcaggaaggatggcatctttttgtttatccttttgaaggtaaaattatccat
caaggtcttgctttgttagttgctcatcgtttatcaaaaaaagcgtctcaaacttttaca
ataagtacaaatgattatggatttgaattgctgagccggaagtctttccaggaggaaatg
ctaacaacggaacttttttcaactcaatatatgaatgaagacatccaggaattgattaat
actcaagaaattggaaaaaggtattttagagatattgctagaattgcaggattaatcttt
ccaggttatccacacaaacataaaacaaatagacaagtacaaatcagcagtagcctttta
tttgatgttttacaaaaatatgacgcaaataatttgctgctacagcaagctaaaaaggaa
gtattagatattcaatttgaaaaaattcagctaaaaaattgtttaacacgtttatctcaa
gctcaattaatgataaaaaaactcaaaaaatttagcccctttggattggagttatttgta
gaacgcgttaatgacactttatctacagaaagcttaacagagcgaattaagcaaattcaa
aatagttggttctga

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