Candidatus Protochlamydia amoebophila: PC_RS05175
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Entry
PC_RS05175 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcu
Candidatus Protochlamydia amoebophila
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcu03032
]
PC_RS05175
03400 DNA repair and recombination proteins [BR:
pcu03400
]
PC_RS05175
Enzymes [BR:
pcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PC_RS05175
DNA replication proteins [BR:
pcu03032
]
Prokaryotic type
DNA Topoisomerases
PC_RS05175
DNA repair and recombination proteins [BR:
pcu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PC_RS05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Toxin_BN_H
PS-DH
Motif
Other DBs
NCBI-ProteinID:
CAF23798
UniProt:
Q6MCA1
LinkDB
All DBs
Position
complement(1303050..1305620)
Genome browser
AA seq
856 aa
AA seq
DB search
MSYTKDEVIVSRNVEDEMKDSYLRYSMSVIISRALPDARDGLKPSQRRILYAMRQLNLGP
NGKHRKCAKISGDTSGDYHPHGEMVIYPTLVRMAQKWIMRYNLVDGQGNFGSVDGDPPAA
MRYTEARLTTAAVQLMDDLDKDTVEMVPNYDETKKEPTVFPSKFPNLLCNGSSGIAVGMA
TNIPPHNLNELIKATLLLLENPTTSIDDIMKVMPGPDFPTGGMICGYRGIKEAFHTGRGK
LILRGVIRVEENEDNPDRSRLAIDEIPYNVNKSRLIEHIAELINNKTITGISDLRDESDK
DGMRIVIELKRGEVPEVIINQLYKFSDLQITFGCNMLALDKGLPRTMNVKQLISVWIEHR
IDVVRRRTRFELNKAEARAHILEGYLKAIDHLDEVVRLIRASSNRDEARIELIKQFEFTE
RQANAILDLRLYQLTGLERDKINDEYQELLKKIDYLRAVLASEAMVKEIIREELLDIQKH
HKSERQTQIIAAETEVNMEDLIANEPVIITISQDDYIKRMPVNTFREQRRGGQGVTGMQL
KREEDVIKGLYVATTHDYLLIFTNLGRCYWLKVWQIPETGRKSKGKPLINLLEDIRPEEK
IATIQRVSSFEEEACILMATKRAVVKKSLLNEFSNPRRKGIWALDIDEGDELVAARLVKP
EQQVMLFTHQGMAVRFEESNVRPMGRTARGVKGATLRGENDYIVGCEVVNGDESILVVCE
NGFGKRSQVDDFRQTNRGGVGVRSIITSERNGKVIGALCVTDEDGMVMMSATGQTVRINM
NDLRVMGRNTQGVKLANLKENDYLVAIQKLQGSENQSEELLASDTIELNENNVSFESPEI
KMSVKPSSEEITDQSE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacactaaagacgaagtcatcgtttctcgaaacgtagaagatgaaatgaaagat
agctatttacgctattcaatgtcagtcatcatttctcgcgctcttccggatgcacgtgat
ggtttaaaaccctctcagcgtcgaattctctatgctatgcgacaacttaatctaggtcct
aatggaaagcatagaaaatgtgccaaaatttcgggtgacacgtcgggtgactaccatcca
catggagaaatggtcatttacccaactctcgttagaatggctcagaagtggattatgcga
tacaatttggtagatggacaaggaaacttcggttctgttgatggagatcctccggctgcg
atgcgttatactgaagctcgtttgacaacagcagctgtccaactgatggacgacttggat
aaagacactgttgaaatggttcctaactatgatgagactaagaaagaacctactgttttt
ccttctaaatttcctaatcttctttgcaacggttcatctggaattgcggtggggatggct
acgaatattcctcctcacaatttaaatgagttaatcaaagcaactttactcttgttagaa
aatcctacaacttcaattgatgacattatgaaggtgatgcccggcccagattttccaaca
ggagggatgatttgcggttatcgggggattaaagaagctttccatacaggaaggggaaag
ctcattttaagaggagtcattcgagttgaggaaaacgaagataatccggatcgttctcgt
ttagccatcgatgaaattccctacaatgtaaataaatcccgtttaatcgaacacattgca
gaactcatcaataataaaacgattacagggatttcagatttacgcgatgagtccgataaa
gatggaatgcgtattgttatcgaattaaagcgtggagaagttccagaagttatcatcaat
cagctttataagtttagtgatttgcaaattacctttggatgcaacatgcttgcattagat
aaaggtttacctcgtaccatgaatgttaaacagctaatttctgtttggattgaacatcgc
attgatgtggtacgtcgacgtactcgatttgagcttaataaagcagaagcgcgagctcat
attctagaaggatatttaaaagcaattgatcatttagatgaagttgttcgtctgattcgt
gcaagtagtaatcgggatgaggctcgcattgaattaataaaacaatttgaattcactgaa
cgtcaagccaatgcaattttagatttaagactatatcaattaactgggcttgaaagagat
aaaattaatgatgaatatcaagaattgttaaaaaagattgattatttacgagccgtttta
gcaagcgaagcaatggttaaagagattattcgtgaggagctattagatattcaaaagcat
cataaatctgagagacagacacaaatcattgcggcagaaactgaagtcaatatggaagac
ttgatcgcaaatgagcctgtgattattacaatttctcaagatgattatattaagcgtatg
cctgtcaatacatttcgtgagcaacgaagaggtggccagggtgtgacaggaatgcagctc
aagcgagaagaagatgtgattaagggtctatacgttgcaacaacgcacgattatttgctt
attttcactaatctaggtcgttgttattggttaaaagtatggcaaattccagaaacggga
cgcaaatccaaaggaaaacctcttattaatcttttagaagatattcgcccggaagaaaaa
attgcgactattcaacgcgtctcttcttttgaagaagaagcgtgcattttgatggctact
aagcgtgctgttgttaaaaaatcgcttctcaatgaatttagcaaccccagaagaaaaggg
atttgggctcttgacattgatgaaggagacgaacttgttgccgctcgccttgttaaacct
gagcagcaagtaatgctttttactcatcaggggatggcagtccgttttgaagaaagcaac
gttcgcccaatgggaagaacagcacgcggagtcaaaggggcaaccttacgtggtgaaaat
gattatatcgtaggatgtgaagttgttaacggtgatgagtctatcttagtcgtctgtgaa
aatggcttcggtaaacgttctcaggtagatgatttccgccaaacaaatcgaggtggtgta
ggagttcgctctattattacaagtgaacgtaatgggaaggtaatcggagctctctgtgtc
acagatgaagatggcatggttatgatgtctgcaaccgggcaaacagttcgtattaatatg
aatgatcttcgggtcatggggcgcaatacgcaaggcgtcaaattagcaaatttaaaagag
aatgattatcttgtcgctattcagaaattacaaggtagtgaaaatcaaagtgaagagtta
ttagcttcagatacaattgaacttaacgaaaacaacgtttcttttgaatcaccagaaatt
aaaatgtcagtaaagcccagctcagaagaaattactgatcaatcggaatag
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